RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.21□□□□□ -2.06
SSR1-209ENST00000488834 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.21□□□□□ -2.06
SSR1-209ENST00000488834 MCM3APO60318 1980 aa2.21□□□□□ -2.06
SSR1-209ENST00000488834 PARP14Q460N5 1801 aa2.21□□□□□ -2.06
SSR1-209ENST00000488834 PLCH1Q4KWH8 1693 aa2.21□□□□□ -2.06
SSR1-209ENST00000488834 ATG2AQ2TAZ0 1938 aa2.21□□□□□ -2.06
SSR1-209ENST00000488834 MIA3Q5JRA6 1907 aa2.21□□□□□ -2.06
SSR1-209ENST00000488834 TICRRQ7Z2Z1 1910 aa2.21□□□□□ -2.06
SSR1-209ENST00000488834 RGPD2P0DJD1 1756 aa2.21□□□□□ -2.06
SSR1-209ENST00000488834 PXDNLA1KZ92 1463 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TRPM7Q96QT4 1865 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SHANK3Q9BYB0 1731 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SIGLEC1Q9BZZ2 1709 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TRAV30A0A087WSZ9 112 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TGIF2-C20orf24A0A0A6YYL0 155 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TRAV8-4A0A0B4J246 113 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 A0A0D9SFI3 127 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 DHRS12A0PJE2 317 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 DAPL1A0PJW8 107 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR5H1A6NKK0 313 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 CEACAM18A8MTB9 384 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 F5H5K5 113 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 K7ERU9 68 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 LYRM1O43325 122 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SLC37A4O43826 429 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 MFSD11O43934 449 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 GLSO94925 669 aaPredicted RBP2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR2A4O95047 310 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 YIF1AO95070 293 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 P01737 135 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SERPINE1P05121 402 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 CTSLP07711 333 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 ADRA2AP08913 450 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 UCHL1P09936 223 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR5AC1P0C628 307 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SLC35G6P0C7Q6 338 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 HIST1H1EP10412 219 aaKnown RBP2.2□□□□□ -2.06
SSR1-209ENST00000488834 CD79AP11912 226 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 GADD45AP24522 165 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 PSMB9P28065 219 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 S100A7P31151 101 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 MYCNOSP40205 109 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 MAGEA12P43365 314 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TCL1AP56279 114 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 CACNG7P62955 275 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 HBA1P69905 142 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 FAM3AP98173 230 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR1Q1Q15612 314 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 HMGN3Q15651 99 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 PRSS8Q16651 343 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SLC25A35Q3KQZ1 300 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 FAM78AQ5JUQ0 283 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 C1orf194Q5T5A4 169 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SAMD13Q5VXD3 122 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 CST9Q5W186 159 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 ZNF660Q6AZW8 331 aaPredicted RBP2.2□□□□□ -2.06
SSR1-209ENST00000488834 DNAJC24Q6P3W2 148 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 ZNF880Q6PDB4 577 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 FBXW12Q6X9E4 464 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SLC35E3Q7Z769 313 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TMED4Q7Z7H5 227 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 RIMKLAQ8IXN7 391 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 UBALD2Q8IYN6 164 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 HIST3H2BBQ8N257 126 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR4S1Q8NGB4 309 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR13C4Q8NGS5 318 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR13G1Q8NGZ3 307 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 PIFOQ8TCI5 191 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 GNPDA2Q8TDQ7 276 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 CASTOR1Q8WTX7 329 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 ASB17Q8WXJ9 295 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SFRP2Q96HF1 295 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR10C1Q96KK4 312 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 PGLYRP3Q96LB9 341 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 OR2A7Q96R45 310 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TP53RKQ96S44 253 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SULT4A1Q9BR01 284 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 GINS4Q9BRT9 223 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 TLNRD1Q9H1K6 362 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 BOLA2Q9H3K6 86 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 MAP1LC3AQ9H492 121 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 RPP21Q9H633 154 aaKnown RBP2.2□□□□□ -2.06
SSR1-209ENST00000488834 RHOFQ9HBH0 211 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 UBQLN4Q9NRR5 601 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 DNAJC27Q9NZQ0 273 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 VPS29Q9UBQ0 182 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 MTFP1Q9UDX5 166 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 ANXA10Q9UJ72 324 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 PSG8Q9UQ74 426 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 FARSAQ9Y285 508 aaKnown RBP2.2□□□□□ -2.06
SSR1-209ENST00000488834 ZNF257Q9Y2Q1 563 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SIGLEC9Q9Y336 463 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 SNX10Q9Y5X0 201 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 NINQ8N4C6 2090 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 COL1A2P08123 1366 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 DEPDC5O75140 1603 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 GBF1Q92538 1859 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 NUP188Q5SRE5 1749 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 MON2Q7Z3U7 1717 aa2.2□□□□□ -2.06
SSR1-209ENST00000488834 IGSF9BQ9UPX0 1349 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms