RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.09□□□□□ -1.43
APOBEC3A-203ENST00000488758 ZFHX3Q15911 3703 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 FAM90A9PA6NNJ1 464 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 SRRM4A7MD48 611 aaKnown RBP6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 WRBO00258 174 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 ST8SIA3O43173 380 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 MED6O75586 246 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 VENTXO95231 258 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 MOSP00540 346 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 IGKV1D-33P01593 117 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 IGKV1-33P01594 117 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 C1QBP02746 253 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 SNRNP70P08621 437 aaKnown RBP6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 FBP1P09467 338 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 PET100P0DJ07 73 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 PAX6P26367 422 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 NKX2-1P43699 371 aaPredicted RBP6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 EIF2B2P49770 351 aaKnown RBP6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 IL15RAQ13261 267 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 RAB32Q13637 225 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 HNF4GQ14541 408 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 POU2AF1Q16633 256 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 KLF17Q5JT82 389 aaPredicted RBP6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 OR4A47Q6IF82 309 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 C11orf87Q6NUJ2 197 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 Q6ZRM9 215 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 NOXA1Q86UR1 476 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 THNSL2Q86YJ6 484 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 FOXRED2Q8IWF2 684 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 DYNAPQ8N1N2 210 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 OR4D5Q8NGN0 318 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 OR4A5Q8NH83 315 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 C17orf50Q8WW18 174 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 CFHR4Q92496 578 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 HYLS1Q96M11 299 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 MEGF9Q9H1U4 602 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 YAE1D1Q9NRH1 226 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 COA4Q9NYJ1 87 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 BET1LQ9NYM9 111 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 CACFD1Q9UGQ2 172 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 NSG2Q9Y328 171 aa6.08□□□□□ -1.44
APOBEC3A-203ENST00000488758 FXYD6-FXYD2A0A087WZ82 144 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 A0A0U1RQK1 487 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 K7EPK0 472 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 L7N2F9 121 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 UPK2O00526 184 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 SLC25A17O43808 307 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 CD5LO43866 347 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 PITX3O75364 302 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 NXPH3O95157 252 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 MPC2O95563 127 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 IFNA17P01571 189 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 MBPP02686 304 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 OR9G9P0C7N8 305 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 P0C879 139 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 SAA1P0DJI8 122 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 TMEM11P17152 192 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 PVALBP20472 110 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 CD24P25063 80 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 NUP62P37198 522 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 UBE2KP61086 200 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 VAMP2P63027 116 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 ID3Q02535 119 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 HABP2Q14520 560 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 PLGLAQ15195 96 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 Q5BKY6 102 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 CXorf66Q5JRM2 361 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 FAM71E2Q8N5Q1 922 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 TEX45Q8NA69 505 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 RBMXL1Q96E39 390 aaKnown RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 AJUBAQ96IF1 538 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 EAF1Q96JC9 268 aaPredicted RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 RITA1Q96K30 269 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 CLCC1Q96S66 551 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 QTRT1Q9BXR0 403 aaKnown RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 FKBP11Q9NYL4 201 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 C1RLQ9NZP8 487 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 KIAA1456Q9P272 454 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 PRNDQ9UKY0 176 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 RCL1Q9Y2P8 373 aaKnown RBP6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 POMT1Q9Y6A1 747 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 ABCA1O95477 2261 aa6.07□□□□□ -1.44
APOBEC3A-203ENST00000488758 NF1P21359 2839 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 TRAV14DV4A0A0A6YYC5 116 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 TRAV3A0A0B4J244 114 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 NCBP2LA6PVI3 153 aaKnown RBP6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 CEBPZOSA8MTT3 80 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 FAM90A26D6RGX4 464 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 BOLA2-SMG1P6H3BVE0 249 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 RRHO14718 337 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 NBR2O15453 112 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 CHST1O43916 411 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 ACTL6BO94805 426 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 KBTBD11O94819 623 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 SPDEFO95238 335 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 IGLV2-23P01705 113 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 SLC25A4P12235 298 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 SRP14P37108 136 aaKnown RBP6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 OR2B8PP59922 312 aa6.06□□□□□ -1.44
APOBEC3A-203ENST00000488758 SPCS3P61009 180 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms