RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PROCRQ9UNN8 238 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 SLC25A15Q9Y619 301 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 CTXND1A0A1B0GTU2 59 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 SPINT2O43291 252 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 NDUFS6O75380 124 aaKnown RBP10.48□□□□□ -0.73
CLIC4-202ENST00000488683 PSMB3P49720 205 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 PRB3Q04118 309 aaPredicted RBP10.48□□□□□ -0.73
CLIC4-202ENST00000488683 FAM27E3Q08E93 113 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 BSXQ3C1V8 233 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 TMEM37Q8WXS4 190 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 NAV3Q8IVL0 2385 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF891A8MT65 544 aaPredicted RBP10.47□□□□□ -0.73
CLIC4-202ENST00000488683 SRRM5B3KS81 715 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 PHOX2AO14813 284 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 IFNA1P01562 189 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 C1QTNF9P0C862 333 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 CD82P27701 267 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 HTD2P86397 168 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 FAM90A1Q86YD7 464 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF709Q8N972 641 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 MS4A5Q9H3V2 200 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 TMEM242Q9NWH2 141 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 WASF3Q9UPY6 502 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 A0A1B0GWJ7 208 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 C11orf94C9JXX5 98 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 PPP1R2P9O14990 202 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 FOXH1O75593 365 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 NDUFB4O95168 129 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 GYPAP02724 150 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 GATA2P23769 480 aaPredicted RBP10.47□□□□□ -0.73
CLIC4-202ENST00000488683 GALR1P47211 349 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 GAMTQ14353 236 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 MLANAQ16655 118 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 ABCA1O95477 2261 aa10.47□□□□□ -0.73
CLIC4-202ENST00000488683 CD1BP29016 333 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 CDC34P49427 236 aaPredicted RBP10.46□□□□□ -0.73
CLIC4-202ENST00000488683 LOXL3P58215 753 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 PMS2P11Q13670 270 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 CYP2G1PQ6ZSU1 146 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 FAM216BQ8N7L0 139 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 OR4A16Q8NH70 328 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 RND1Q92730 232 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 NAT8Q9UHE5 227 aa10.46□□□□□ -0.73
CLIC4-202ENST00000488683 ACTL6BO94805 426 aa10.46□□□□□ -0.74
CLIC4-202ENST00000488683 KBTBD11O94819 623 aa10.46□□□□□ -0.74
CLIC4-202ENST00000488683 ADH4P08319 380 aa10.46□□□□□ -0.74
CLIC4-202ENST00000488683 THBS3P49746 956 aa10.46□□□□□ -0.74
CLIC4-202ENST00000488683 GNB1P62873 340 aa10.46□□□□□ -0.74
CLIC4-202ENST00000488683 CCL13Q99616 98 aa10.46□□□□□ -0.74
CLIC4-202ENST00000488683 IFI27L2Q9H2X8 130 aa10.46□□□□□ -0.74
CLIC4-202ENST00000488683 AHRRA9YTQ3 701 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 GNB2P62879 340 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 TCF23Q7RTU1 214 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 TCTEX1D1Q8N7M0 179 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 OR13D1Q8NGV5 346 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 C1orf159Q96HA4 380 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 CIB3Q96Q77 187 aaPredicted RBP10.45□□□□□ -0.74
CLIC4-202ENST00000488683 ACTR3CQ9C0K3 210 aaPredicted RBP10.45□□□□□ -0.74
CLIC4-202ENST00000488683 TMEM140Q9NV12 185 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 GFOD1Q9NXC2 390 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 FUT9Q9Y231 359 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 DYSFO75923 2080 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 IGHV3-48P01763 117 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 PFN1P07737 140 aaKnown RBP10.45□□□□□ -0.74
CLIC4-202ENST00000488683 ARL14EPLP0DKL9 152 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 DLX1P56177 255 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 PAX5Q02548 391 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 CT45A1Q5HYN5 189 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 TREML4Q6UXN2 200 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 LYG1Q8N1E2 194 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 CT45A3Q8NHU0 189 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 PFDN5Q99471 154 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 MGST2Q99735 147 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 FAM215AQ9Y5M1 114 aa10.45□□□□□ -0.74
CLIC4-202ENST00000488683 TRBV24-1A0A075B6N3 115 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 SAA2-SAA4A0A096LPE2 208 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 SEC14L6B5MCN3 397 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 H7BYZ3 331 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 SAA2P0DJI9 122 aaPredicted RBP10.44□□□□□ -0.74
CLIC4-202ENST00000488683 CCL8P80075 99 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 SEPSECSQ9HD40 501 aaKnown RBP10.44□□□□□ -0.74
CLIC4-202ENST00000488683 ZNF318Q5VUA4 2279 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 TRBV20OR9-2A0A075B6H5 130 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 TM4SF5O14894 197 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 FRMD6-AS1P0C7T7 363 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 REG1BP48304 166 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 FAM78BQ5VT40 261 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 LINC00469Q8N7U9 141 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 HIST1H2BLQ99880 126 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 TUBG2Q9NRH3 451 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 CALYQ9NYX4 217 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 JPT1Q9UK76 154 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 WDR83OSQ9Y284 106 aa10.44□□□□□ -0.74
CLIC4-202ENST00000488683 SCO2A0A1W2PP80 73 aa10.43□□□□□ -0.74
CLIC4-202ENST00000488683 MBD3L4A6NDZ8 208 aaPredicted RBP10.43□□□□□ -0.74
CLIC4-202ENST00000488683 MBD3L3A6NE82 208 aaPredicted RBP10.43□□□□□ -0.74
CLIC4-202ENST00000488683 MBD3L5A6NJ08 208 aaPredicted RBP10.43□□□□□ -0.74
CLIC4-202ENST00000488683 TMEM250H0YL14 139 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms