RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 GOLGA3Q08378 1498 aa0.78□□□□□ -2.28
SMC4-220ENST00000488017 TEX14Q8IWB6 1497 aa0.78□□□□□ -2.28
SMC4-220ENST00000488017 NEO1Q92859 1461 aa0.78□□□□□ -2.28
SMC4-220ENST00000488017 EFCAB6Q5THR3 1501 aa0.78□□□□□ -2.28
SMC4-220ENST00000488017 ZMYM4Q5VZL5 1548 aa0.78□□□□□ -2.28
SMC4-220ENST00000488017 ARAP3Q8WWN8 1544 aa0.78□□□□□ -2.28
SMC4-220ENST00000488017 DUOX2Q9NRD8 1548 aa0.78□□□□□ -2.28
SMC4-220ENST00000488017 KIAA0556O60303 1618 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 KIF21BO75037 1637 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 RNF17Q9BXT8 1623 aaKnown RBP0.78□□□□□ -2.29
SMC4-220ENST00000488017 PLCH1Q4KWH8 1693 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 MON2Q7Z3U7 1717 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 PARP4Q9UKK3 1724 aaKnown RBP0.78□□□□□ -2.29
SMC4-220ENST00000488017 CRYBG1Q9Y4K1 1723 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 STRCP1A6NGW2 1772 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 SLX4Q8IY92 1834 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 GBF1Q92538 1859 aa0.78□□□□□ -2.29
SMC4-220ENST00000488017 GREB1Q4ZG55 1949 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 EML6Q6ZMW3 1958 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 HEATR5AQ86XA9 2040 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 A0A087WX48 190 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.77□□□□□ -2.29
SMC4-220ENST00000488017 A0A0A6YYH2 397 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 TRAV8-3A0A0A6YYJ7 113 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 FAM92AA1XBS5 289 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PGPA6NDG6 321 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PRORSD1PA6NEY8 169 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR5H14A6NHG9 310 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 A6NJ64 397 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 CD300LBA8K4G0 201 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 C9J4A7 227 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 M0QZK8 103 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PLPP3O14495 311 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 COPEO14579 308 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 TP53I11O14683 189 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PHYHO14832 338 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 SLC16A4O15374 487 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 CCL25O15444 150 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 FGF16O43320 207 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 DCTN3O75935 186 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR2J2O76002 312 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 FAM107AO95990 144 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 IFNA10P01566 189 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 IFNA5P01569 189 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OPN1SWP03999 348 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 CECR9P0C854 216 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 ZNF25P17030 456 aaPredicted RBP0.77□□□□□ -2.29
SMC4-220ENST00000488017 GPX2P18283 190 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PRTN3P24158 256 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 KDELR1P24390 212 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 KDELR2P33947 212 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 CA5AP35218 305 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 IFNGR2P38484 337 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 RBP2P50120 134 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 RAB25P57735 213 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR10A3P58181 314 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 GNGT1P63211 74 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 BTG2P78543 158 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 DEFB103AP81534 67 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 DEFA6Q01524 100 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 STX4Q12846 297 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 FOXF1Q12946 379 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 SKP2Q13309 424 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 ANGPT1Q15389 498 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR8G1Q15617 311 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 CST6Q15828 149 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 USF2Q15853 346 aaPredicted RBP0.77□□□□□ -2.29
SMC4-220ENST00000488017 GUK1Q16774 197 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PYY3Q5JQD4 70 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 LAMTOR1Q6IAA8 161 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 LAIR2Q6ISS4 152 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 NOXRED1Q6NXP6 359 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 HAGHLQ6PII5 290 aaPredicted RBP0.77□□□□□ -2.29
SMC4-220ENST00000488017 LRRN1Q6UXK5 716 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 TCF23Q7RTU1 214 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 SCXQ7RTU7 201 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 SMIM15Q7Z3B0 74 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 GRINAQ7Z429 371 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 LYZL2Q7Z4W2 148 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 FUNDC1Q8IVP5 155 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 IFT20Q8IY31 132 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 SYS1Q8N2H4 156 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR1M1Q8NGA1 313 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR51D1Q8NGF3 324 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR5B17Q8NGF7 314 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR13C9Q8NGT0 318 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR2Y1Q8NGV0 311 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR13D1Q8NGV5 346 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR10K1Q8NGX5 313 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 OR51Q1Q8NH59 317 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 CD200R1Q8TD46 325 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 GNPDA2Q8TDQ7 276 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 FAM172AQ8WUF8 416 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 RNF133Q8WVZ7 376 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 DNAJC9Q8WXX5 260 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 C11orf40Q8WZ69 217 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PTH2Q96A98 100 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 TCEAL4Q96EI5 215 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 PYURFQ96I23 114 aa0.77□□□□□ -2.29
SMC4-220ENST00000488017 TEX37Q96LM6 180 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms