RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 HES4Q9HCC6 221 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 NAT8Q9UHE5 227 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 INTS1Q8N201 2190 aaKnown RBP0.7□□□□□ -2.3
CCDC66-221ENST00000487739 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
CCDC66-221ENST00000487739 IGKV3D-7A0A0C4DH55 119 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 IGKV3OR2-268A0A0C4DH90 116 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 ORC5O43913 435 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 NSA2O95478 260 aaKnown RBP0.69□□□□□ -2.3
CCDC66-221ENST00000487739 HLA-DRAP01903 254 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 OCMP0CE72 109 aaPredicted RBP0.69□□□□□ -2.3
CCDC66-221ENST00000487739 CCL5P13501 91 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 PSMB8P28062 276 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 G6PCP35575 357 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 CDK5R1Q15078 307 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 CLEC6AQ6EIG7 209 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 UNQ6190/PRO20217Q6UXQ8 127 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 SGMS2Q8NHU3 365 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 HAVCR2Q8TDQ0 301 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 ATP6V1G3Q96LB4 118 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 KCTD7Q96MP8 289 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 CYSTM1Q9H1C7 97 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 IMP3Q9NV31 184 aaKnown RBP0.69□□□□□ -2.3
CCDC66-221ENST00000487739 ANAPC10Q9UM13 185 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 SOX21Q9Y651 276 aaPredicted RBP0.69□□□□□ -2.3
CCDC66-221ENST00000487739 NUP160Q12769 1436 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 KIF15Q9NS87 1388 aa0.69□□□□□ -2.3
CCDC66-221ENST00000487739 SCAF11Q99590 1463 aaKnown RBP0.68□□□□□ -2.3
CCDC66-221ENST00000487739 STRCQ7RTU9 1775 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 IGKV2-40A0A087WW87 121 aaPredicted RBP0.68□□□□□ -2.3
CCDC66-221ENST00000487739 TRAPPC2LH3BP13 241 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 M0QX08 132 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 PLA2G10O15496 165 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 IGKV2D-40P01614 121 aaPredicted RBP0.68□□□□□ -2.3
CCDC66-221ENST00000487739 GLI3P10071 1580 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 CCL1P22362 96 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 CD40LGP29965 261 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 ALDH3A1P30838 453 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 EMP1P54849 157 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 EMX1Q04741 257 aaPredicted RBP0.68□□□□□ -2.3
CCDC66-221ENST00000487739 Q1T7F1 81 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 ARHGAP11BQ3KRB8 267 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 ACSM3Q53FZ2 586 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 C1orf194Q5T5A4 169 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 FAM27BQ5VT28 67 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 OR5B17Q8NGF7 314 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 MBD3L1Q8WWY6 194 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 ACOT12Q8WYK0 555 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 SPANXB1Q9NS25 103 aaPredicted RBP0.68□□□□□ -2.3
CCDC66-221ENST00000487739 PLEKHJ1Q9NW61 149 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 PRELID1Q9Y255 219 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 GMEB1Q9Y692 573 aa0.68□□□□□ -2.3
CCDC66-221ENST00000487739 SMARCA4P51532 1647 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 MICAL3Q7RTP6 2002 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 IGKV3-7A0A075B6H7 116 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 MEIKINA0A087WXM9 373 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 MEIS3P1A6NDR6 274 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 GOLGA8KD6RF30 607 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 GOLGA8MH3BSY2 632 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 TYMSP04818 313 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 RPSAP08865 295 aaKnown RBP0.67□□□□□ -2.3
CCDC66-221ENST00000487739 TRGC1P0CF51 173 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 CDC34P49427 236 aaPredicted RBP0.67□□□□□ -2.3
CCDC66-221ENST00000487739 AKR1C1Q04828 323 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 TMED1Q13445 227 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 SURF2Q15527 256 aaPredicted RBP0.67□□□□□ -2.3
CCDC66-221ENST00000487739 C9orf64Q5T6V5 341 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 CST9Q5W186 159 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 PLEKHG7Q6ZR37 379 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 SSX8Q7RTT4 187 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 TMEM251Q8N6I4 163 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 C9orf163Q8N9P6 203 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 TMEM161BQ8NDZ6 487 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 TESCQ96BS2 214 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 ADAT1Q9BUB4 502 aaKnown RBP0.67□□□□□ -2.3
CCDC66-221ENST00000487739 DKKL1Q9UK85 242 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 C15orf41Q9Y2V0 281 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 TIMM22Q9Y584 194 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 KIF24Q5T7B8 1368 aa0.67□□□□□ -2.3
CCDC66-221ENST00000487739 BRWD1Q9NSI6 2320 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 OR51F1A6NGY5 319 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 LST1O00453 97 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 LEPROTO15243 131 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 IL3P08700 152 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 MSNP26038 577 aaKnown RBP0.66□□□□□ -2.3
CCDC66-221ENST00000487739 DDTP30046 118 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 MAP2K4P45985 399 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 REG1BP48304 166 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 RAB13P51153 203 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 BLVRAP53004 296 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 HIST1H4AP62805 103 aaKnown RBP0.66□□□□□ -2.3
CCDC66-221ENST00000487739 ELOBQ15370 118 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 RSU1Q15404 277 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 TNFAIP8L3Q5GJ75 292 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 FAM78BQ5VT40 261 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 TNFAIP8L2Q6P589 184 aaPredicted RBP0.66□□□□□ -2.3
CCDC66-221ENST00000487739 HIST2H3AQ71DI3 136 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 SLC51BQ86UW2 128 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 COMMD7Q86VX2 200 aa0.66□□□□□ -2.3
CCDC66-221ENST00000487739 Q8N2B8 174 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms