RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 MAP1LC3AQ9H492 121 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 TRAV14DV4A0A0A6YYC5 116 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
EPHB4-206ENST00000487222 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 CYP2G1PQ6ZSU1 146 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 NPIPB3Q92617 1050 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 SPTBN2O15020 2390 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 GRIFINA4D1Z8 144 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 UNQ5815/PRO19632Q6UWF5 114 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 Q6ZT83 130 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 TIMP4Q99727 224 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 TMEM70Q9BUB7 260 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
EPHB4-206ENST00000487222 SRP19P09132 144 aaKnown RBP12.49□□□□□ -0.41
EPHB4-206ENST00000487222 SMAGPQ0VAQ4 97 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 OR10AG1Q8NH19 301 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 SMIM12Q96EX1 92 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 EP300Q09472 2414 aaPredicted RBP12.49□□□□□ -0.41
EPHB4-206ENST00000487222 SOD3P08294 240 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 LTBRP36941 435 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 CENPWQ5EE01 88 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 C12orf77C9JDV5 145 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 UQCRFS1P47985 274 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 C2orf83Q53S99 150 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 EBLN2Q6P2I7 272 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 TCF24Q7RTU0 167 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 GUCD1Q96NT3 240 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 EGR1P18146 543 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 FBLN5Q9UBX5 448 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 NEUROG3Q9Y4Z2 214 aa12.49□□□□□ -0.41
EPHB4-206ENST00000487222 PPIAL4CA0A0B4J2A2 164 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 RFPL3SP0C7P2 107 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 PPIAL4GP0DN37 164 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 C21orf62-AS1Q17RA5 79 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 CBLN4Q9NTU7 201 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 RRHO14718 337 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 SS18L1O75177 396 aaPredicted RBP12.48□□□□□ -0.41
EPHB4-206ENST00000487222 TM4SF20Q53R12 229 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 ZCCHC14Q8WYQ9 949 aaKnown RBP12.48□□□□□ -0.41
EPHB4-206ENST00000487222 IL6RP08887 468 aaPredicted RBP12.48□□□□□ -0.41
EPHB4-206ENST00000487222 CRIPAKQ8N1N5 446 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 CRXO43186 299 aaPredicted RBP12.48□□□□□ -0.41
EPHB4-206ENST00000487222 REC114Q7Z4M0 266 aa12.48□□□□□ -0.41
EPHB4-206ENST00000487222 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
EPHB4-206ENST00000487222 RTTNQ86VV8 2226 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 ANOS1P23352 680 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 RAB9AP51151 201 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 PCSK4Q6UW60 755 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 ZNF703Q9H7S9 590 aaPredicted RBP12.47□□□□□ -0.41
EPHB4-206ENST00000487222 TRBV23-1A0A0A0MS06 115 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 PF4V1P10720 104 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 CBLN1P23435 193 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 RAB37Q96AX2 223 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 WFIKKN1Q96NZ8 548 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 NEU1Q99519 415 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 C1QTNF5Q9BXJ0 243 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 ZNF646O15015 1829 aaPredicted RBP12.47□□□□□ -0.41
EPHB4-206ENST00000487222 ERASQ7Z444 233 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 SYT8Q8NBV8 401 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 CLEC7AQ9BXN2 247 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 ABCA7Q8IZY2 2146 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 LNP1A1A4G5 178 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 GDF9O60383 454 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 ACP7Q6ZNF0 438 aa12.47□□□□□ -0.41
EPHB4-206ENST00000487222 A0A087WWC5 75 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 WNT9BO14905 357 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 GLRXP35754 106 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 GPX4P36969 197 aaPredicted RBP12.46□□□□□ -0.41
EPHB4-206ENST00000487222 RSPO4Q2I0M5 234 aaPredicted RBP12.46□□□□□ -0.41
EPHB4-206ENST00000487222 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.41
EPHB4-206ENST00000487222 ZNF324O75467 553 aaPredicted RBP12.46□□□□□ -0.41
EPHB4-206ENST00000487222 REG1AP05451 166 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 ZNF883P0CG24 379 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 GCSHP23434 173 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 SGK494Q96LW2 274 aa12.46□□□□□ -0.41
EPHB4-206ENST00000487222 SSBP3Q9BWW4 388 aaPredicted RBP12.46□□□□□ -0.41
EPHB4-206ENST00000487222 NPIPB6E9PJ23 425 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 COX6CP09669 75 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 CX3CL1P78423 397 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 RPL39P5Q59GN2 51 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 GOLT1AQ6ZVE7 132 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 OSR1Q8TAX0 266 aaPredicted RBP12.46□□□□□ -0.42
EPHB4-206ENST00000487222 RNF115Q9Y4L5 304 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 HBBP68871 147 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 ATRAIDQ6UW56 229 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 BIVMQ86UB2 503 aa12.46□□□□□ -0.42
EPHB4-206ENST00000487222 NUDT3O95989 172 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 OTX1P32242 354 aaPredicted RBP12.45□□□□□ -0.42
EPHB4-206ENST00000487222 CLEC2AQ6UVW9 174 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 FADS6Q8N9I5 356 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 H3BTX0 84 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 GFRA1P56159 465 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 PLP1P60201 277 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 TUBA4BQ9H853 241 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 PHLDA3Q9Y5J5 127 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 ATP1A1-AS1Q5TC04 95 aa12.45□□□□□ -0.42
EPHB4-206ENST00000487222 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.45□□□□□ -0.42
EPHB4-206ENST00000487222 MIEN1Q9BRT3 115 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms