RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 SMIM8Q96KF7 97 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 RHOVQ96L33 236 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 SLC25A31Q9H0C2 315 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 RBKSQ9H477 322 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 LYRM2Q9NU23 88 aaPredicted RBP6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 BET1LQ9NYM9 111 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 DPM3Q9P2X0 92 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 CACFD1Q9UGQ2 172 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 WSB1Q9Y6I7 421 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 DOCK11Q5JSL3 2073 aa6.95□□□□□ -1.3
NUDCD3-209ENST00000487118 TRAV3A0A0B4J244 114 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 A0A1W2PPI3 338 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 IGSF23A1L1A6 192 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 FAM24AA6NFZ4 105 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 C15orf61A6NNL5 157 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 SRRM4A7MD48 611 aaKnown RBP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 LEUTXA8MZ59 168 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 OOSP1A8MZH6 123 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 UPK2O00526 184 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 SHOXO15266 292 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 TOX4O94842 621 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 LY86O95711 162 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 USF1P22415 310 aaPredicted RBP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 CEACAM3P40198 252 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 UBE2KP61086 200 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 RPL23AP62750 156 aaKnown RBP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 EWSR1Q01844 656 aaKnown RBP eCLIP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 HABP2Q14520 560 aaPredicted RBP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 MINOS1Q5TGZ0 78 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 SSX9Q7RTT3 188 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 VKORC1L1Q8N0U8 176 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 OR8H3Q8N146 312 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 TMEM252Q8N6L7 170 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 OR4C13Q8NGP0 309 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 OR4A5Q8NH83 315 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 ST8SIA2Q92186 375 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 RPEQ96AT9 228 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 FLYWCH2Q96CP2 140 aaKnown RBP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 HARBI1Q96MB7 349 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 QTRT1Q9BXR0 403 aaKnown RBP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 FBXL17Q9UF56 701 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 FOXA2Q9Y261 457 aaPredicted RBP6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 MINOS1-NBL1R4GNA1 71 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
NUDCD3-209ENST00000487118 H7C2Y5 167 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 IFNA7P01567 189 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 IGLV2-23P01705 113 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 FGF2P09038 288 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 SAA1P0DJI8 122 aaPredicted RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 IAPPP10997 89 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 LGALS7P47929 136 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 CAV2P51636 162 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 UBE2E1P51965 193 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 OR2B8PP59922 312 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 SPCS3P61009 180 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 BAXQ07812 192 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 EXOSC2Q13868 293 aaKnown RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 STPG2Q8N412 459 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 OR4A16Q8NH70 328 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 TMEM167AQ8TBQ9 72 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 CFHR4Q92496 578 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 BSCL2Q96G97 398 aaPredicted RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 CIB3Q96Q77 187 aaPredicted RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 RNF5Q99942 180 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 ZNF471Q9BX82 626 aaPredicted RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 MS4A7Q9GZW8 240 aaPredicted RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 ZC4H2Q9NQZ6 224 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 TMEM14BQ9NUH8 114 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 PSENENQ9NZ42 101 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 PRNDQ9UKY0 176 aa6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 PAIP2BQ9ULR5 123 aaKnown RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 TBL2Q9Y4P3 447 aaKnown RBP6.93□□□□□ -1.3
NUDCD3-209ENST00000487118 RBMXL2O75526 392 aaKnown RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 KBTBD11O94819 623 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 SPDEFO95238 335 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 CRYGBP07316 175 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 MSMBP08118 114 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 TPT1P13693 172 aaKnown RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 CD1BP29016 333 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 VDAC2P45880 294 aaPredicted RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 HSPE1P61604 102 aaKnown RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 RPS16P62249 146 aaKnown RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 EIF5AP63241 154 aaKnown RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 NHLH2Q02577 135 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 LOXL1Q08397 574 aaPredicted RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 PRSS57Q6UWY2 283 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 TMEM14EPQ6UXP3 125 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 LHFPL4Q7Z7J7 247 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 MOB3BQ86TA1 216 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 VSTM2AQ8TAG5 236 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 DTD1Q8TEA8 209 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 SCARB1Q8WTV0 552 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 ZDHHC16Q969W1 377 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 RBMXL1Q96E39 390 aaKnown RBP6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 PHYHIPLQ96FC7 376 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 TMUB1Q9BVT8 246 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 ARV1Q9H2C2 271 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 WFDC1Q9HC57 220 aa6.92□□□□□ -1.3
NUDCD3-209ENST00000487118 UBQLN2Q9UHD9 624 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms