RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 OR2B8PP59922 312 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 RAB11AP62491 216 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 CYB5R2Q6BCY4 276 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 ETV3LQ6ZN32 361 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 ZCCHC24Q8N2G6 241 aaKnown RBP7.48□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF645Q8N7E2 425 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF709Q8N972 641 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 IL1F10Q8WWZ1 152 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 AGMATQ9BSE5 352 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 TMEM147Q9BVK8 224 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 GNG13Q9P2W3 67 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 OR14J1Q9UGF5 321 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 NAT8Q9UHE5 227 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 CDC42EP3Q9UKI2 254 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 DMRT1Q9Y5R6 373 aa7.48□□□□□ -1.21
COL12A1-208ENST00000486533 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.48□□□□□ -1.21
COL12A1-208ENST00000486533 CTXND1A0A1B0GTU2 59 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 MAP1LC3B2A6NCE7 125 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 TMEM250H0YL14 139 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 TNFSF12O43508 249 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 GATCO43716 136 aaKnown RBP7.47□□□□□ -1.21
COL12A1-208ENST00000486533 PGA5P0DJD9 388 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 IGHV4-31P0DP07 118 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 PPP1CBP62140 327 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 SLC38A11Q08AI6 406 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 TMEM267Q0VDI3 215 aaPredicted RBP7.47□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF146Q15072 292 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 ELOBQ15370 118 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 SLC35E4Q6ICL7 350 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 Q6P435 159 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 GALMQ96C23 342 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 FAM210BQ96KR6 192 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 OR5B12Q96R08 314 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 PFDN5Q99471 154 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 BPESC1Q9GZL8 116 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 MAP1LC3BQ9GZQ8 125 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 WDR61Q9GZS3 305 aaKnown RBP7.47□□□□□ -1.21
COL12A1-208ENST00000486533 CHODLQ9H9P2 273 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 KCNIP2Q9NS61 270 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.47□□□□□ -1.21
COL12A1-208ENST00000486533 MBNL3Q9NUK0 354 aaKnown RBP7.47□□□□□ -1.21
COL12A1-208ENST00000486533 SLC39A9Q9NUM3 307 aa7.47□□□□□ -1.21
COL12A1-208ENST00000486533 ANK3Q12955 4377 aaKnown RBP7.47□□□□□ -1.21
COL12A1-208ENST00000486533 IGHV4-61A0A0C4DH41 118 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 FAM90A9PA6NNJ1 464 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 IQCF6A8MYZ5 107 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 VWC2LB2RUY7 222 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 SLC33A1O00400 549 aaPredicted RBP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 CLN5O75503 358 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 PTBP3O95758 552 aaKnown RBP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 OR2H2O95918 312 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 FBP1P09467 338 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 CA6P23280 308 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 IL2RGP31785 369 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 RUNX1Q01196 453 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 OR2T2Q6IF00 324 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF66Q6ZN08 573 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 SLC16A13Q7RTY0 426 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 CENPVQ7Z7K6 275 aaPredicted RBP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 BATF2Q8N1L9 274 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 NEU4Q8WWR8 484 aaPredicted RBP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 TAF15Q92804 592 aaKnown RBP eCLIP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 TXNDC17Q9BRA2 123 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 MRPL37Q9BZE1 423 aaKnown RBP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 ACTR3CQ9C0K3 210 aaPredicted RBP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 FGF23Q9GZV9 251 aaPredicted RBP7.46□□□□□ -1.21
COL12A1-208ENST00000486533 HSPB7Q9UBY9 170 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 FZR1Q9UM11 496 aa7.46□□□□□ -1.21
COL12A1-208ENST00000486533 TRBV24-1A0A075B6N3 115 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 SMCO3A2RU48 225 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 ZFP92A6NM28 416 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 CEBPZOSA8MTT3 80 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 ZNF727A8MUV8 499 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 H0YL77 283 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 SIRPB1O00241 398 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 RAB29O14966 203 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 CYB5BO43169 146 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 TMEM50AO95807 157 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 NGFP01138 241 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 METTL15P1P0C7V9 234 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 CCL2P13500 99 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 CEACAM6P40199 344 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 WNT5AP41221 380 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 ERVK11-1P61568 191 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 CCL20P78556 96 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 TNFRSF9Q07011 255 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 TMEM14EPQ6UXP3 125 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 CYP2G1PQ6ZSU1 146 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 SCCPDHQ8NBX0 429 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 OR10P1Q8NGE3 313 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 Q8WTZ3 238 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 LHX4Q969G2 390 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 RCC1LQ96I51 464 aaKnown RBP7.46□□□□□ -1.22
COL12A1-208ENST00000486533 HSD17B10Q99714 261 aaKnown RBP7.46□□□□□ -1.22
COL12A1-208ENST00000486533 SDF2L1Q9HCN8 221 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 GSN-AS1Q9NRJ2 163 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 DUSP13Q9UII6 198 aa7.46□□□□□ -1.22
COL12A1-208ENST00000486533 PPP1R3CQ9UQK1 317 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms