RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 UPK2O00526 184 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 FCN1O00602 326 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 SLC25A17O43808 307 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 KBTBD11O94819 623 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 OR2A4O95047 310 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 SLC25A6P12236 298 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 RELBQ01201 579 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 PPP1R27Q86WC6 154 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 ZNF695Q8IW36 515 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 Q8N2B8 174 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 C12orf45Q8N5I9 185 aaPredicted RBP12.56□□□□□ -0.4
APOE-205ENST00000485628 GPR146Q96CH1 333 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 OR2A7Q96R45 310 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 PHB2Q99623 299 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 FBXL15Q9H469 300 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 GPN1Q9HCN4 374 aaPredicted RBP12.56□□□□□ -0.4
APOE-205ENST00000485628 TMEM140Q9NV12 185 aa12.56□□□□□ -0.4
APOE-205ENST00000485628 TRAV3A0A0B4J244 114 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 BTBD17A6NE02 478 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 GPR137BO60478 399 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 CREBL2O60519 120 aaPredicted RBP12.55□□□□□ -0.4
APOE-205ENST00000485628 PITX3O75364 302 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 ATG12O94817 140 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 HLA-DRB1P01911 266 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 OR9G9P0C7N8 305 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 PRSS8Q16651 343 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 C2orf68Q2NKX9 166 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 VMA21Q3ZAQ7 101 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 LIN54Q6MZP7 749 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 VSTM2AQ8TAG5 236 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 JMJD8Q96S16 334 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 OR51J1Q9H342 316 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 TMEM14BQ9NUH8 114 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 COA4Q9NYJ1 87 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
APOE-205ENST00000485628 TMED3Q9Y3Q3 217 aa12.55□□□□□ -0.4
APOE-205ENST00000485628 C2CD3Q4AC94 2353 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 BLCAPP62952 87 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 PJVKQ0ZLH3 352 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 IL15RAQ13261 267 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 IZUMO4Q1ZYL8 232 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 GGNBP1Q5YKI7 109 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 Q6ZS46 218 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 SSX9Q7RTT3 188 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 FOXRED2Q8IWF2 684 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 ZNF430Q9H8G1 570 aaPredicted RBP12.54□□□□□ -0.4
APOE-205ENST00000485628 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
APOE-205ENST00000485628 IGHV7-81A0A0B4J1V7 117 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 CGB1A6NKQ9 187 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 NCBP2LA6PVI3 153 aaKnown RBP12.53□□□□□ -0.4
APOE-205ENST00000485628 TCF21O43680 179 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 ADAP1O75689 374 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 TSPAN9O75954 239 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 IGHG2P01859 326 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 EGR2P11161 476 aaPredicted RBP12.53□□□□□ -0.4
APOE-205ENST00000485628 ERVK-16P61578 105 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 PDLIM3Q53GG5 364 aaPredicted RBP12.53□□□□□ -0.4
APOE-205ENST00000485628 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 H2BFWTQ7Z2G1 175 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 ZNF429Q86V71 674 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 DMBX1Q8NFW5 382 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
APOE-205ENST00000485628 SETD2Q9BYW2 2564 aaPredicted RBP12.53□□□□□ -0.4
APOE-205ENST00000485628 A0A1B0GU03 582 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 A0A1B0GW64 132 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 MPTX1A8MV57 137 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 E7EUB6 86 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 MAS1LP35410 378 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 CRIP2P52943 208 aaPredicted RBP12.52□□□□□ -0.41
APOE-205ENST00000485628 CX3CL1P78423 397 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 SRSF4Q08170 494 aaKnown RBP12.52□□□□□ -0.41
APOE-205ENST00000485628 MMD2Q8IY49 270 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 RANBP3Q9H6Z4 567 aaPredicted RBP12.52□□□□□ -0.41
APOE-205ENST00000485628 ZNF702PQ9H963 129 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 TNFRSF19Q9NS68 423 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 KIAA1456Q9P272 454 aa12.52□□□□□ -0.41
APOE-205ENST00000485628 FOXA2Q9Y261 457 aaPredicted RBP12.52□□□□□ -0.41
APOE-205ENST00000485628 FAM181BA6NEQ2 426 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 C15orf61A6NNL5 157 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 HOXB5P09067 269 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 AKR1C2P52895 323 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
APOE-205ENST00000485628 NDPQ00604 133 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 C19orf54Q5BKX5 351 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
APOE-205ENST00000485628 OR10C1Q96KK4 312 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 RASL11BQ9BPW5 248 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 HSPB9Q9BQS6 159 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 ZNF257Q9Y2Q1 563 aa12.51□□□□□ -0.41
APOE-205ENST00000485628 LINC01548A6NM66 108 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 CA2P00918 260 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 SULT1A3P0DMM9 295 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 SULT1A4P0DMN0 295 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 COMPP49747 757 aaPredicted RBP12.5□□□□□ -0.41
APOE-205ENST00000485628 OR2B8PP59922 312 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 SMCO1Q147U7 214 aa12.5□□□□□ -0.41
APOE-205ENST00000485628 LURAP1LQ8IV03 231 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms