RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 BAK1Q16611 211 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 POU2AF1Q16633 256 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 AKIRIN2Q53H80 203 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 TMEM128Q5BJH2 165 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 CXorf66Q5JRM2 361 aaPredicted RBP6.54□□□□□ -1.36
SF3A1-208ENST00000485618 THOC7Q6I9Y2 204 aaKnown RBP6.54□□□□□ -1.36
SF3A1-208ENST00000485618 FAAP20Q6NZ36 180 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 HSD17B13Q7Z5P4 300 aaPredicted RBP6.54□□□□□ -1.36
SF3A1-208ENST00000485618 TMED4Q7Z7H5 227 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 ZNF695Q8IW36 515 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 FAM219AQ8IW50 185 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 CENPSQ8N2Z9 138 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 STPG2Q8N412 459 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 OR5M8Q8NGP6 311 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 OR4A16Q8NH70 328 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 WFDC12Q8WWY7 111 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 ARPC1AQ92747 370 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 R3HDM4Q96D70 268 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 C5orf30Q96GV9 206 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 WNT10AQ9GZT5 417 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 NAA60Q9H7X0 242 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 PARP11Q9NR21 331 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 ZFP57Q9NU63 452 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 SERTAD4Q9NUC0 356 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 BET1LQ9NYM9 111 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 PRNDQ9UKY0 176 aa6.54□□□□□ -1.36
SF3A1-208ENST00000485618 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 FAM240BA0A1B0GVZ2 78 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 TCRBV4S1A1TA0A5B7 111 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 CRYM-AS1A6NIL9 109 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 MARCH11A6NNE9 402 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 SRRM4A7MD48 611 aaKnown RBP6.53□□□□□ -1.36
SF3A1-208ENST00000485618 LYRM1O43325 122 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 RAMP3O60896 148 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 RBMXL2O75526 392 aaKnown RBP6.53□□□□□ -1.36
SF3A1-208ENST00000485618 KBTBD11O94819 623 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 S1PR2O95136 353 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 CA2P00918 260 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 CRYGBP07316 175 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 ELANEP08246 267 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 SAA1P0DJI8 122 aaPredicted RBP6.53□□□□□ -1.36
SF3A1-208ENST00000485618 HLA-GP17693 338 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 CNTFRP26992 372 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 AKR1C2P52895 323 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 DEFA6Q01524 100 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 FOXE3Q13461 319 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 TNXAQ16473 311 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 PDLIM3Q53GG5 364 aaPredicted RBP6.53□□□□□ -1.36
SF3A1-208ENST00000485618 OR4A47Q6IF82 309 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 SSX9Q7RTT3 188 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 LGI3Q8N145 548 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 GRPEL2Q8TAA5 225 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 TMEM167AQ8TBQ9 72 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 IL22RA2Q969J5 263 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 GPHA2Q96T91 129 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 SRSF8Q9BRL6 282 aaKnown RBP6.53□□□□□ -1.36
SF3A1-208ENST00000485618 RTBDNQ9BSG5 229 aaPredicted RBP6.53□□□□□ -1.36
SF3A1-208ENST00000485618 PDCD10Q9BUL8 212 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 C5orf66Q9H5L9 145 aa6.53□□□□□ -1.36
SF3A1-208ENST00000485618 FOXA2Q9Y261 457 aaPredicted RBP6.53□□□□□ -1.36
SF3A1-208ENST00000485618 A0A0G2JLM5 398 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 SH2D7A6NKC9 451 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-208ENST00000485618 H3BUA1 57 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 UPK2O00526 184 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 FCN1O00602 326 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 UPK1BO75841 260 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 NDUFB6O95139 128 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 CDS2O95674 445 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 VAMP1P23763 118 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 UCP1P25874 307 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 G6PCP35575 357 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
SF3A1-208ENST00000485618 C2orf68Q2NKX9 166 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 FAM209BQ5JX69 171 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 UNQ5815/PRO19632Q6UWF5 114 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 NDUFA11Q86Y39 141 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 VKORC1L1Q8N0U8 176 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 PUSL1Q8N0Z8 303 aaKnown RBP6.52□□□□□ -1.37
SF3A1-208ENST00000485618 OR4F17Q8NGA8 305 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 OR1L8Q8NGR8 309 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 OR5B3Q8NH48 314 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 ENKURQ8TC29 256 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 RBPMSQ93062 196 aaKnown RBP6.52□□□□□ -1.37
SF3A1-208ENST00000485618 GALNT14Q96FL9 552 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 TMEM56Q96MV1 263 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 OR4F4Q96R69 305 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 SDHCQ99643 169 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-208ENST00000485618 CITED1Q99966 193 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 TMEM222Q9H0R3 208 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 SLA2Q9H6Q3 261 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 ZNF430Q9H8G1 570 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-208ENST00000485618 ZNF355PQ9NSJ1 428 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 TMEM140Q9NV12 185 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 TSSC4Q9Y5U2 329 aaPredicted RBP6.52□□□□□ -1.37
SF3A1-208ENST00000485618 WSB1Q9Y6I7 421 aa6.52□□□□□ -1.37
SF3A1-208ENST00000485618 DUXBA0A1W2PPF3 345 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 ATP6V0E1O15342 81 aa6.51□□□□□ -1.37
SF3A1-208ENST00000485618 IFNA21P01568 189 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms