RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RRNAD1Q96FB5 475 aaKnown RBP13.98□□□□□ -0.17
CHMP3-207ENST00000485465 RASL11BQ9BPW5 248 aa13.98□□□□□ -0.17
CHMP3-207ENST00000485465 TPSG1Q9NRR2 321 aa13.98□□□□□ -0.17
CHMP3-207ENST00000485465 BET1LQ9NYM9 111 aa13.98□□□□□ -0.17
CHMP3-207ENST00000485465 SIGLEC9Q9Y336 463 aa13.98□□□□□ -0.17
CHMP3-207ENST00000485465 ALG5Q9Y673 324 aa13.98□□□□□ -0.17
CHMP3-207ENST00000485465 AMY1AP04745 511 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 P0C879 139 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 H2BFWTQ7Z2G1 175 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 UXS1Q8NBZ7 420 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 OR4A5Q8NH83 315 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 RNASE11Q8TAA1 199 aaKnown RBP13.97□□□□□ -0.17
CHMP3-207ENST00000485465 TMEM167AQ8TBQ9 72 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 LSM10Q969L4 123 aaKnown RBP13.97□□□□□ -0.17
CHMP3-207ENST00000485465 OR51J1Q9H342 316 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 MMP24Q9Y5R2 645 aa13.97□□□□□ -0.17
CHMP3-207ENST00000485465 A0A0G2JRQ6 117 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 UPK2O00526 184 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 KBTBD11O94819 623 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 HOXB5P09067 269 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 VDAC1P21796 283 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 MRGPRG-AS1Q2M3A8 158 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 PPP1R27Q86WC6 154 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 FAM219AQ8IW50 185 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 GPR146Q96CH1 333 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 CLCC1Q96S66 551 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 RANBP3Q9H6Z4 567 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-207ENST00000485465 TMED3Q9Y3Q3 217 aa13.96□□□□□ -0.17
CHMP3-207ENST00000485465 TRAV3A0A0B4J244 114 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 FCN1O00602 326 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 ADAP1O75689 374 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 OR9G9P0C7N8 305 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 PJVKQ0ZLH3 352 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 PRSS8Q16651 343 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 IZUMO4Q1ZYL8 232 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 NMSQ5H8A3 153 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 GGNBP1Q5YKI7 109 aa13.95□□□□□ -0.18
CHMP3-207ENST00000485465 ZNF430Q9H8G1 570 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-207ENST00000485465 FAM181BA6NEQ2 426 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 SH2D7A6NKC9 451 aaPredicted RBP13.94□□□□□ -0.18
CHMP3-207ENST00000485465 SNAPC5O75971 98 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 HLA-DRB1P01911 266 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 BLCAPP62952 87 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 RELBQ01201 579 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 Q6ZNX1 250 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 Q6ZRM9 215 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 MMD2Q8IY49 270 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 TEP1Q99973 2627 aaKnown RBP13.94□□□□□ -0.18
CHMP3-207ENST00000485465 NPFFR1Q9GZQ6 430 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 NSG2Q9Y328 171 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 CUBNO60494 3623 aa13.94□□□□□ -0.18
CHMP3-207ENST00000485465 TRIM77I1YAP6 450 aa13.93□□□□□ -0.18
CHMP3-207ENST00000485465 SSNA1O43805 119 aa13.93□□□□□ -0.18
CHMP3-207ENST00000485465 CA2P00918 260 aa13.93□□□□□ -0.18
CHMP3-207ENST00000485465 IFNA21P01568 189 aa13.93□□□□□ -0.18
CHMP3-207ENST00000485465 RPL15P61313 204 aaKnown RBP13.93□□□□□ -0.18
CHMP3-207ENST00000485465 RPL8P62917 257 aaKnown RBP13.93□□□□□ -0.18
CHMP3-207ENST00000485465 OR4A16Q8NH70 328 aa13.93□□□□□ -0.18
CHMP3-207ENST00000485465 A0A1B0GU03 582 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 FGF2P09038 288 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 HLA-GP17693 338 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 MAS1LP35410 378 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 OR2B8PP59922 312 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 GNB1P62873 340 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 CX3CL1P78423 397 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 C2orf68Q2NKX9 166 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 C9orf152Q5JTZ5 239 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 ZNF562Q6V9R5 426 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 HSPB9Q9BQS6 159 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 PRSS22Q9GZN4 317 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 CACNG5Q9UF02 275 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 PRNDQ9UKY0 176 aa13.92□□□□□ -0.18
CHMP3-207ENST00000485465 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 C15orf61A6NNL5 157 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 MPTX1A8MV57 137 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 CCSO14618 274 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 CRYBA1P05813 215 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 SULT1A3P0DMM9 295 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 SULT1A4P0DMN0 295 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 SLC25A6P12236 298 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 SSBP2P81877 361 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-207ENST00000485465 SRSF2Q01130 221 aaKnown RBP13.91□□□□□ -0.18
CHMP3-207ENST00000485465 SMCO1Q147U7 214 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 TNXAQ16473 311 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 Q6ZS46 218 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 FOXRED2Q8IWF2 684 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-207ENST00000485465 TMEM14BQ9NUH8 114 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 FKBP11Q9NYL4 201 aa13.91□□□□□ -0.18
CHMP3-207ENST00000485465 FOXA2Q9Y261 457 aaPredicted RBP13.91□□□□□ -0.18
CHMP3-207ENST00000485465 GOSR2O14653 212 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 RBMXL2O75526 392 aaKnown RBP13.9□□□□□ -0.18
CHMP3-207ENST00000485465 ACTL6BO94805 426 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 CNIH1O95406 144 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 IGHG2P01859 326 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 MYOD1P15172 320 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 COMPP49747 757 aaPredicted RBP13.9□□□□□ -0.18
CHMP3-207ENST00000485465 FXYD3Q14802 87 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 THOC7Q6I9Y2 204 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms