RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 HDGFL3Q9Y3E1 203 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 MAST4O15021 2626 aa0.19□□□□□ -2.38
CCDC66-219ENST00000484441 KIAA1109Q2LD37 5005 aa0.19□□□□□ -2.38
CCDC66-219ENST00000484441 LRRK2Q5S007 2527 aa0.19□□□□□ -2.38
CCDC66-219ENST00000484441 MAP1BP46821 2468 aaKnown RBP0.19□□□□□ -2.38
CCDC66-219ENST00000484441 METTL15A6NJ78 407 aa0.19□□□□□ -2.38
CCDC66-219ENST00000484441 C9orf64Q5T6V5 341 aa0.19□□□□□ -2.38
CCDC66-219ENST00000484441 OR8B3Q8NGG8 313 aa0.19□□□□□ -2.38
CCDC66-219ENST00000484441 COL6A5A8TX70 2615 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 STAB2Q8WWQ8 2551 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 TNRC6BQ9UPQ9 1833 aaKnown RBP0.18□□□□□ -2.38
CCDC66-219ENST00000484441 FRAS1Q86XX4 4008 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 ACACBO00763 2458 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.18□□□□□ -2.38
CCDC66-219ENST00000484441 DAPL1A0PJW8 107 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 TRAPPC2LH3BP13 241 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 PPBPP02775 128 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 HLA-DQB2P05538 268 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 F8A1P23610 371 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 DHFR2Q86XF0 187 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 C12orf29Q8N999 325 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 OR5AK3PQ8NH89 298 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 TRABDQ9H4I3 376 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 ZNHIT6Q9NWK9 470 aaKnown RBP0.18□□□□□ -2.38
CCDC66-219ENST00000484441 NAT8Q9UHE5 227 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 ABCA12Q86UK0 2595 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 RYR3Q15413 4870 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 ANKRD11Q6UB99 2663 aaPredicted RBP0.18□□□□□ -2.38
CCDC66-219ENST00000484441 LRPPRCP42704 1394 aaKnown RBP0.18□□□□□ -2.38
CCDC66-219ENST00000484441 ABCA13Q86UQ4 5058 aa0.18□□□□□ -2.38
CCDC66-219ENST00000484441 EML5Q05BV3 1969 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 MUC2Q02817 5179 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 TMED7-TICAM2A0A0A6YYA0 188 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 FLNAP21333 2647 aaKnown RBP0.17□□□□□ -2.38
CCDC66-219ENST00000484441 SYT1P21579 422 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 RPS24P62847 133 aaKnown RBP0.17□□□□□ -2.38
CCDC66-219ENST00000484441 SMAGPQ0VAQ4 97 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 EBPQ15125 230 aaKnown RBP0.17□□□□□ -2.38
CCDC66-219ENST00000484441 FAM27BQ5VT28 67 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 TEX36Q5VZQ5 186 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 RAB2BQ8WUD1 216 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 TESCQ96BS2 214 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 LRRC45Q96CN5 670 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 XAGE1AQ9HD64 81 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 CHD6Q8TD26 2715 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 ABCA2Q9BZC7 2435 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
CCDC66-219ENST00000484441 RYR2Q92736 4967 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 EPG5Q9HCE0 2579 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 HECTD1Q9ULT8 2610 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 RASSF6Q6ZTQ3 369 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 MYO18BQ8IUG5 2567 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 APCP25054 2843 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 MGAM2Q2M2H8 2515 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 NAV3Q8IVL0 2385 aa0.16□□□□□ -2.38
CCDC66-219ENST00000484441 CCDC168Q8NDH2 2452 aa0.15□□□□□ -2.38
CCDC66-219ENST00000484441 USP9XQ93008 2570 aaPredicted RBP0.15□□□□□ -2.38
CCDC66-219ENST00000484441 STRCQ7RTU9 1775 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 LOC110117498A0A087WWA1 95 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 TEX50A0A1B0GTY4 177 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 AZIN1O14977 448 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 CXCL2P19875 107 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 CXCL3P19876 107 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 C17orf78Q8N4C9 275 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 OR5L1Q8NGL2 311 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 RBP7Q96R05 134 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 CCL13Q99616 98 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 TMEM109Q9BVC6 243 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 TP53TG1Q9Y2A0 90 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 SSPOA2VEC9 5147 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 HERC1Q15751 4861 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 A0A1W2PP64 1363 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 NBEAL2Q6ZNJ1 2754 aa0.15□□□□□ -2.39
CCDC66-219ENST00000484441 EIF4G1Q04637 1599 aaKnown RBP0.15□□□□□ -2.39
CCDC66-219ENST00000484441 EPPK1P58107 5090 aaKnown RBP0.14□□□□□ -2.39
CCDC66-219ENST00000484441 RNF213Q63HN8 5207 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 C19orf84I3L1E1 186 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 ADAP1O75689 374 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 APOMO95445 188 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 MSMBP08118 114 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 GRPRP30550 384 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 KDELR2P33947 212 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 SLCO1A2P46721 670 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 HLA-DRB3P79483 266 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 SPATA24Q86W54 205 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 SBSPONQ8IVN8 264 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 SLC22A24Q8N4F4 322 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 ACOT12Q8WYK0 555 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 HYDINQ4G0P3 5121 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 KIF24Q5T7B8 1368 aa0.14□□□□□ -2.39
CCDC66-219ENST00000484441 CACNA1HO95180 2353 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 RIMS2Q9UQ26 1411 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 ASH1LQ9NR48 2969 aaKnown RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 TLN1Q9Y490 2541 aaKnown RBP0.13□□□□□ -2.39
CCDC66-219ENST00000484441 VWFP04275 2813 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 TRBV10-2A0A0K0K1G8 114 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 LOC100506127A0A0U1RQW1 187 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 IRGMA1A4Y4 181 aa0.13□□□□□ -2.39
CCDC66-219ENST00000484441 C5orf49A4QMS7 147 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms