RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 CHODLQ9H9P2 273 aa16.4■□□□□ 0.22
RPUSD3-216ENST00000484134 SEPSECSQ9HD40 501 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-216ENST00000484134 PSG11Q9UQ72 335 aa16.4■□□□□ 0.22
RPUSD3-216ENST00000484134 AHCTF1Q8WYP5 2266 aa16.4■□□□□ 0.22
RPUSD3-216ENST00000484134 OOEPA6NGQ2 149 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 NTN3O00634 580 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 PROP1O75360 226 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 IGFBP4P22692 258 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 TGFBR3Q03167 851 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 FOXF2Q12947 444 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 MMD2Q8IY49 270 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 NINJ1Q92982 152 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 TRAV9-1A0A075B6T8 112 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 GCHFRP30047 84 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 CTRLP40313 264 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 CXCL12P48061 93 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 OR1C1Q15619 314 aa16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 BCL2L2Q92843 193 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-216ENST00000484134 SPINK4O60575 86 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 RAB7AP51149 207 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 VKORC1L1Q8N0U8 176 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 OR8I2Q8N0Y5 310 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 ABHD12Q8N2K0 398 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 SIGLECL1Q8N7X8 197 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 Q8TCH9 128 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 OPN3Q9H1Y3 402 aaPredicted RBP16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 LOXL2Q9Y4K0 774 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 V9GYV3 84 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 MPDU1O75352 247 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 KIAA1644Q3SXP7 199 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 COL5A1-AS1Q5SY13 56 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 SLC35E4Q6ICL7 350 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 GMPPAQ96IJ6 420 aaPredicted RBP16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 EAF1Q96JC9 268 aaPredicted RBP16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 DCTN5Q9BTE1 182 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 METRNQ9UJH8 293 aa16.38■□□□□ 0.21
RPUSD3-216ENST00000484134 DIRC3C9JPN6 131 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 SIAH2O43255 324 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 GABRA2P47869 451 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 TCTEX1D1Q8N7M0 179 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 OR13A1Q8NGR1 328 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 PLPPR2Q96GM1 343 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 RCHY1Q96PM5 261 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 HES4Q9HCC6 221 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 ZFP30Q9Y2G7 519 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 TBL2Q9Y4P3 447 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 PRR14LQ5THK1 2151 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 TRAV3A0A0B4J244 114 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 VDAC2P45880 294 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 RPEL1Q2QD12 228 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 C11orf42Q8N5U0 333 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 STPG4Q8N801 248 aa16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 HEYLQ9NQ87 328 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-216ENST00000484134 PRRC2CQ9Y520 2896 aaKnown RBP16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 TCF21O43680 179 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 SMPD2O60906 423 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 CHRNB4P30926 498 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 TRA2AQ13595 282 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 EFNB3Q15768 340 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 AARDQ4LEZ3 155 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 C1orf174Q8IYL3 243 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 HSD17B10Q99714 261 aaKnown RBP16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 FAM173AQ9BQD7 235 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 SFXN3Q9BWM7 321 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 NRN1Q9NPD7 142 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 FCGR3BO75015 233 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 NDUFB8O95169 186 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 C11orf53Q8IXP5 236 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 RNF2Q99496 336 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 DNAJC4Q9NNZ3 241 aa16.36■□□□□ 0.21
RPUSD3-216ENST00000484134 GFRA3O60609 400 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 PCP4P48539 62 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 TMPRSS3P57727 454 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 SLC35B1P78383 322 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 LTC4SQ16873 150 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 TIPARPQ7Z3E1 657 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 OR4B1Q8NGF8 309 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 C11orf52Q96A22 123 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 GNB1LQ9BYB4 327 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 LSM4Q9Y4Z0 139 aaKnown RBP16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 TRGV10A0A0A0MS01 117 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 C9JCJ5 164 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 SPATA45Q537H7 98 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 DCAF12Q5T6F0 453 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 WDR31Q8NA23 367 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 SLC35E1Q96K37 410 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 SLC45A2Q9UMX9 530 aa16.35■□□□□ 0.21
RPUSD3-216ENST00000484134 A0A1W2PS18 150 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 DUTP33316 252 aaKnown RBP16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 PRAMEF5Q5TYX0 476 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 PRAMEF6Q5VXH4 476 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 SLC25A40Q8TBP6 338 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 CT55Q8WUE5 264 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 TTTY12Q9BZ98 90 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 FAM234AQ9H0X4 552 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 ZNF586Q9NXT0 402 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 NAT8BQ9UHF3 227 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 COL6A3P12111 3177 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 CGAP01215 116 aa16.34■□□□□ 0.21
RPUSD3-216ENST00000484134 ZNF83P51522 516 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms