RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 MRPS26Q9BYN8 205 aaKnown RBP4.47□□□□□ -1.69
SEMA3D-204ENST00000484038 MAP6D1Q9H9H5 199 aa4.47□□□□□ -1.69
SEMA3D-204ENST00000484038 OR1A1Q9P1Q5 309 aa4.47□□□□□ -1.69
SEMA3D-204ENST00000484038 IGKV2D-30A0A075B6S6 120 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 LOC102724200A0A096LPH7 203 aaPredicted RBP4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 PNMA8CA0A1B0GUJ8 204 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 C2orf70A6NJV1 201 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 PRH1P02810 166 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 FOLR2P14207 255 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 GABRB1P18505 474 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 CAPGP40121 348 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 ETV1P50549 477 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 RHOGP84095 191 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 Q499Y3 187 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 TMPRSS11AQ6ZMR5 421 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 C6orf201Q7Z4U5 140 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 ZFP41Q8N8Y5 198 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 ZNF383Q8NA42 475 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 OR52B4Q8NGK2 314 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 CACNG8Q8WXS5 425 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 THRSPQ92748 146 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 TMEM68Q96MH6 324 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 AGMATQ9BSE5 352 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 C9orf16Q9BUW7 83 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 ZC4H2Q9NQZ6 224 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 SLC35D1Q9NTN3 355 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 ZNF230Q9UIE0 474 aaPredicted RBP4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 ZNF221Q9UK13 617 aa4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 RPL36Q9Y3U8 105 aaKnown RBP4.46□□□□□ -1.69
SEMA3D-204ENST00000484038 TRBV5-5A0A0J9YX44 114 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 CCDC160A6NGH7 325 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 MSGN1A6NI15 193 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 FAM223BA6NKX1 122 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 PPP5D1E7EU14 171 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 M0R1X1 148 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 HLA-AP01891 365 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 OR9G9P0C7N8 305 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 ZBTB25P24278 435 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 CEACAM6P40199 344 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 KIR2DS2P43631 304 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 RPL5P46777 297 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 HLA-DRB3P79483 266 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 ATP5G2Q06055 141 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 TNFRSF9Q07011 255 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 CBX3Q13185 183 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 TNXAQ16473 311 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 DEFB135Q30KP9 77 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 YIF1BQ5BJH7 314 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 LGALS9CQ6DKI2 356 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 OR10K2Q6IF99 312 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 MOB1BQ7L9L4 216 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 FAM223AQ8IWN6 122 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 TMEM61Q8N0U2 210 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 PACRGLQ8N7B6 248 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 NKAIN3Q8N8D7 197 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 ADAD2Q8NCV1 583 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 TSPAN14Q8NG11 270 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 KCNG3Q8TAE7 436 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 ACOT12Q8WYK0 555 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 PLEKHA2Q9HB19 425 aa4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 SMPD3Q9NY59 655 aaPredicted RBP4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 TECRQ9NZ01 308 aaKnown RBP4.46□□□□□ -1.7
SEMA3D-204ENST00000484038 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 SMIM31A0A1B0GVY4 71 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 ITGB1BP1O14713 200 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 OGG1O15527 345 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 OR2C1O95371 312 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 NAPSAO96009 420 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 LALBAP00709 142 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 IGLV2-23P01705 113 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 MYL12AP19105 171 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 CBLN1P23435 193 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 BMI1P35226 326 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 RPS11P62280 158 aaKnown RBP eCLIP4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 C15orf32Q32M92 178 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 ZNF57Q68EA5 555 aaPredicted RBP4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 IDO2Q6ZQW0 420 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 DHRSXQ8N5I4 330 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 RHOXF1Q8NHV9 184 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 C2CD4CQ8TF44 421 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 PHLDA1Q8WV24 401 aaPredicted RBP4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 SRSF12Q8WXF0 261 aaKnown RBP4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 UQCC2Q9BRT2 126 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 NICN1Q9BSH3 213 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 HDHD3Q9BSH5 251 aaPredicted RBP4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 TMEM59Q9BXS4 323 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 KCNK15Q9H427 330 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 PLEKHJ1Q9NW61 149 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 BABAM2Q9NXR7 383 aa4.45□□□□□ -1.7
SEMA3D-204ENST00000484038 KIAA1109Q2LD37 5005 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 RYR1P21817 5038 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 TRBV5-7A0A0A0MS05 114 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 ZNF320A2RRD8 509 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 GAGE12JA6NER3 117 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 GGCTO75223 188 aaKnown RBP4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 OR2J3O76001 311 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 IGHV3-23P01764 117 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 CRYGBP07316 175 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 SCTP09683 121 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 HTR2CP28335 458 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms