RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 GAL3ST2Q9H3Q3 398 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 CBLN4Q9NTU7 201 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 SPG11Q96JI7 2443 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 SRRM4A7MD48 611 aaKnown RBP7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 RBMXL2O75526 392 aaKnown RBP7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 SEC11BP0C7V7 166 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 REG1BP48304 166 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 MEOX2P50222 304 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 SPCS3P61009 180 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 RPL23AP62750 156 aaKnown RBP7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 BAXQ07812 192 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 TMEM155Q4W5P6 130 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 EIF5AL1Q6IS14 154 aaKnown RBP7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 ATRAIDQ6UW56 229 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 GPR61Q9BZJ8 451 aa7.22□□□□□ -1.25
CDC42SE1-204ENST00000483763 FAM90A26D6RGX4 464 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 AGPAT2O15120 278 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 RBFOX2O43251 390 aaKnown RBP eCLIP7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 GOSR1O95249 250 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 G0S2P27469 103 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF266Q14584 549 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 SAPCD1Q5SSQ6 148 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 Q6ZRG5 221 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 RHOVQ96L33 236 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR4C12Q96R67 309 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 RAB9BQ9NP90 201 aa7.21□□□□□ -1.26
CDC42SE1-204ENST00000483763 PMS2P5A8MQ11 134 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 DAOP14920 347 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 MYOD1P15172 320 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 NQO2P16083 231 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 CDKN1AP38936 164 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 RELBQ01201 579 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 BTNL8Q6UX41 500 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM14EPQ6UXP3 125 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM182Q6ZP80 229 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 BPIFCQ8NFQ6 507 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 SAT2Q96F10 170 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 ATP5SQ99766 215 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 SAV1Q9H4B6 383 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM231Q9H6L2 316 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM140Q9NV12 185 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 CACFD1Q9UGQ2 172 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 TET2Q6N021 2002 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 ATG12O94817 140 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 IGHV1-8P0DP01 117 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 IGFBP2P18065 325 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 AKR1D1P51857 326 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 TAS2R30P59541 319 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR8G2PQ6IF36 304 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF833PQ6ZTB9 187 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 DTX2Q86UW9 622 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF525Q8N782 197 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR10A7Q8NGE5 316 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR4S2Q8NH73 311 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 LYPD6BQ8NI32 183 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 DTD1Q8TEA8 209 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 MRPL20Q9BYC9 149 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 RAB1BQ9H0U4 201 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 FAM96BQ9Y3D0 163 aa7.2□□□□□ -1.26
CDC42SE1-204ENST00000483763 HSBP1L1C9JCN9 74 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 J3QR06 171 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 RPL35P42766 123 aaKnown RBP7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 HNF4GQ14541 408 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR4A47Q6IF82 309 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR2G3Q8NGZ4 309 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 ST6GALNAC6Q969X2 333 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 RSG1Q9BU20 258 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 UBTD1Q9HAC8 227 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 MMP26Q9NRE1 261 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 A0A1B0GV50 99 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 FAM74A7A6NL05 159 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 C9JQL5 133 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 PPIHO43447 177 aaKnown RBP7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 FSTL3O95633 263 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 IFNA17P01571 189 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 ADCYAP1P18509 176 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 THBS3P49746 956 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 ZNF616Q08AN1 781 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM30BQ3MIR4 351 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 ABHD12Q8N2K0 398 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 TSNAXQ99598 290 aaKnown RBP7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 PARP11Q9NR21 331 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 GSN-AS1Q9NRJ2 163 aa7.19□□□□□ -1.26
CDC42SE1-204ENST00000483763 A0A087X0M5 115 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 A0A1B0GX30 115 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 CEBPZOSA8MTT3 80 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 C22orf46C9J442 243 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 PJVKQ0ZLH3 352 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 WDR25Q64LD2 544 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR10X1Q8NGY0 326 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 OR4A16Q8NH70 328 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 TMEM170AQ8WVE7 144 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 NARS2Q96I59 477 aaKnown RBP7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 RITA1Q96K30 269 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 FBXO7Q9Y3I1 522 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 PLXNB1O43157 2135 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 C15orf62A8K5M9 175 aa7.18□□□□□ -1.26
CDC42SE1-204ENST00000483763 H0YJW9 148 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms