RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DRAM1Q8N682 238 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 OR4C5Q8NGB2 326 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 OR5C1Q8NGR4 320 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 OR2G3Q8NGZ4 309 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 SCGB1C1Q8TD33 95 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 GPR146Q96CH1 333 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 PSMG3Q9BT73 122 aaPredicted RBP6.37□□□□□ -1.39
SNX13-208ENST00000482558 SMIM3Q9BZL3 60 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 OPN3Q9H1Y3 402 aaPredicted RBP6.37□□□□□ -1.39
SNX13-208ENST00000482558 ESRP2Q9H6T0 727 aaKnown RBP6.37□□□□□ -1.39
SNX13-208ENST00000482558 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.37□□□□□ -1.39
SNX13-208ENST00000482558 JPT1Q9UK76 154 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 TTC28Q96AY4 2481 aa6.37□□□□□ -1.39
SNX13-208ENST00000482558 MYO15AQ9UKN7 3530 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 IGLV3-9A0A075B6K5 115 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 TRAV1-1A0A0B4J248 108 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 IGSF23A1L1A6 192 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 FAM24AA6NFZ4 105 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 C12orf77C9JDV5 145 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 PROB1E7EW31 1015 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 H7C2Y5 167 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 K7N7A8 449 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 RAB29O14966 203 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 RBFOX2O43251 390 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNX13-208ENST00000482558 CLDN14O95500 239 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 HBZP02008 142 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 SFTA3P0C7M3 94 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 MUC1P15941 1255 aaPredicted RBP6.36□□□□□ -1.39
SNX13-208ENST00000482558 GABRA2P47869 451 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 RAB7AP51149 207 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 RAB9AP51151 201 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 ERVS71-1P61550 626 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 ZNF616Q08AN1 781 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 GUK1Q16774 197 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 ALKBH6Q3KRA9 238 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 AKR1C8PQ5T2L2 129 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 LHFPL4Q7Z7J7 247 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 MRGPRGQ86SM5 289 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 ZNF561Q8N587 486 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 GCSAMQ8N6F7 178 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.36□□□□□ -1.39
SNX13-208ENST00000482558 PRSS33Q8NF86 280 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 NUP37Q8NFH4 326 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 OR8U1Q8NH10 309 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 LRRC29Q8WV35 223 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 RAB39BQ96DA2 213 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 FAM234AQ9H0X4 552 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 SLC35B3Q9H1N7 401 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 WFDC1Q9HC57 220 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 OR1A1Q9P1Q5 309 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 CACNG5Q9UF02 275 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 PPP1R3CQ9UQK1 317 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 CBY1Q9Y3M2 126 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
SNX13-208ENST00000482558 LOC105371267A0A1B0GV96 52 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 H0YL77 283 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 DNASE2O00115 360 aaPredicted RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 TNFSF12O43508 249 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 YPEL1O60688 119 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 IGLV2-14P01704 120 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 MBP02144 154 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 ATP6V0CP27449 155 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 CD80P33681 288 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 DYNLT3P51808 116 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 FLI1Q01543 452 aaPredicted RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 COL10A1Q03692 680 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 FAM27E3Q08E93 113 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 SRSF6Q13247 344 aaKnown RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 RHEBQ15382 184 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 USF2Q15853 346 aaPredicted RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 FAM122CQ6P4D5 195 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 Q6ZR03 302 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 PUSL1Q8N0Z8 303 aaKnown RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 FGFRL1Q8N441 504 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 RBMXL3Q8N7X1 1067 aaKnown RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 HSD17B11Q8NBQ5 300 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 OR2Z1Q8NG97 314 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 OR10G4Q8NGN3 311 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 S100PBPQ96BU1 408 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 ADTRPQ96IZ2 230 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 YPEL2Q96QA6 119 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 CLCC1Q96S66 551 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 AIFM2Q9BRQ8 373 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 EIF5A2Q9GZV4 153 aaKnown RBP6.35□□□□□ -1.39
SNX13-208ENST00000482558 TUBA4BQ9H853 241 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 KCNJ16Q9NPI9 418 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 SMCO4Q9NRQ5 59 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 PSENENQ9NZ42 101 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 FAM215AQ9Y5M1 114 aa6.35□□□□□ -1.39
SNX13-208ENST00000482558 LOC105371242A0A075B767 164 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 ODAMA1E959 279 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 LRRC30A6NM36 301 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 M0R1B8 84 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 ZNF737O75373 536 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 CLDN1O95832 211 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 LHBP01229 141 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 IRF2P14316 349 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 ZNF83P51522 516 aa6.34□□□□□ -1.39
SNX13-208ENST00000482558 PAX9P55771 341 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms