RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 Q1T7F1 81 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 C7orf65Q6ZTY9 151 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 LRRC45Q96CN5 670 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 IMMP2LQ96T52 175 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 CHMP5Q9NZZ3 219 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 PCYT1BQ9Y5K3 369 aaPredicted RBP0.92□□□□□ -2.26
CALD1-219ENST00000480638 NBEAQ8NFP9 2946 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 BRCA2P51587 3418 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 MICAL3Q7RTP6 2002 aa0.92□□□□□ -2.26
CALD1-219ENST00000480638 CNOT1A5YKK6 2376 aaKnown RBP0.92□□□□□ -2.26
CALD1-219ENST00000480638 DIDO1Q9BTC0 2240 aaKnown RBP0.92□□□□□ -2.26
CALD1-219ENST00000480638 GVINP1Q7Z2Y8 2422 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 CREBBPQ92793 2442 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 BOD1L1Q8NFC6 3051 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 CPAMD8Q8IZJ3 1885 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 HERC1Q15751 4861 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 AZIN1O14977 448 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 RPSAP08865 295 aaKnown RBP0.91□□□□□ -2.26
CALD1-219ENST00000480638 PSMB8P28062 276 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 EMP1P54849 157 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 TAS2R20P59543 309 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 TPI1P60174 286 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 FABP5Q01469 135 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 DNAL1Q4LDG9 190 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 C15orf53Q8NAA6 179 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 OR5L1Q8NGL2 311 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 MBD3L1Q8WWY6 194 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 C12orf43Q96C57 262 aaKnown RBP0.91□□□□□ -2.26
CALD1-219ENST00000480638 TMA16Q96EY4 203 aaKnown RBP0.91□□□□□ -2.26
CALD1-219ENST00000480638 ADAT1Q9BUB4 502 aaKnown RBP0.91□□□□□ -2.26
CALD1-219ENST00000480638 HTTP42858 3142 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 TPRP12270 2363 aaKnown RBP0.91□□□□□ -2.26
CALD1-219ENST00000480638 RYR2Q92736 4967 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 BAZ1AQ9NRL2 1556 aaPredicted RBP0.91□□□□□ -2.26
CALD1-219ENST00000480638 REREQ9P2R6 1566 aa0.91□□□□□ -2.26
CALD1-219ENST00000480638 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.26
CALD1-219ENST00000480638 WDR87Q6ZQQ6 2873 aa0.9□□□□□ -2.26
CALD1-219ENST00000480638 HIVEP3Q5T1R4 2406 aa0.9□□□□□ -2.26
CALD1-219ENST00000480638 CEP250Q9BV73 2442 aa0.9□□□□□ -2.26
CALD1-219ENST00000480638 MAP1BP46821 2468 aaKnown RBP0.9□□□□□ -2.27
CALD1-219ENST00000480638 ITPR1Q14643 2758 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 A0A0J9YW62 118 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 H7C2G1 150 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 RD3LP0DJH9 198 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 CXCL2P19875 107 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 CXCL3P19876 107 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 HLA-DRB5Q30154 266 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 GPHB5Q86YW7 130 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 RIBC1Q8N443 379 aaPredicted RBP0.9□□□□□ -2.27
CALD1-219ENST00000480638 ABCC12Q96J65 1359 aa0.9□□□□□ -2.27
CALD1-219ENST00000480638 MACF1Q9UPN3 7388 aaKnown RBP0.9□□□□□ -2.27
CALD1-219ENST00000480638 SIPA1L1O43166 1804 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 PTPRSQ13332 1948 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 NEBP20929 6669 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 TLN2Q9Y4G6 2542 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 ITPR2Q14571 2701 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 LRBAP50851 2863 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 NAV1Q8NEY1 1877 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 PCF11O94913 1555 aaKnown RBP0.89□□□□□ -2.27
CALD1-219ENST00000480638 EIF4G1Q04637 1599 aaKnown RBP0.89□□□□□ -2.27
CALD1-219ENST00000480638 ARAP1Q96P48 1450 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 TRAV7A0A075B6U4 112 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 A0A0D9SEW6 157 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 FAM25EA8MYX2 175 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 F8VZ95 297 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 K7ERQ8 282 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 DEFA4P12838 97 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 FKBP1AP62942 108 aaKnown RBP0.89□□□□□ -2.27
CALD1-219ENST00000480638 EMX1Q04741 257 aaPredicted RBP0.89□□□□□ -2.27
CALD1-219ENST00000480638 SURF2Q15527 256 aaPredicted RBP0.89□□□□□ -2.27
CALD1-219ENST00000480638 RPS19BP1Q86WX3 136 aaKnown RBP0.89□□□□□ -2.27
CALD1-219ENST00000480638 CRLF3Q8IUI8 442 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 BOD1L2Q8IYS8 172 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 LFNGQ8NES3 379 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 TMEM109Q9BVC6 243 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 ROS1P08922 2347 aa0.89□□□□□ -2.27
CALD1-219ENST00000480638 SYNE2Q8WXH0 6885 aaKnown RBP0.89□□□□□ -2.27
CALD1-219ENST00000480638 CDH23Q9H251 3354 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 VPS13AQ96RL7 3174 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 CELSR2Q9HCU4 2923 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 IGKV2D-26A0A0A0MRZ7 120 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 TMED7-TICAM2A0A0A6YYA0 188 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 TRAPPC13A5PLN9 417 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 H3BT86 120 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 CCRL2O00421 344 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 CREBL2O60519 120 aaPredicted RBP0.88□□□□□ -2.27
CALD1-219ENST00000480638 HLA-DQB2P05538 268 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 LGALS1P09382 135 aaKnown RBP0.88□□□□□ -2.27
CALD1-219ENST00000480638 RPL28P46779 137 aaKnown RBP0.88□□□□□ -2.27
CALD1-219ENST00000480638 HADHBP55084 474 aaKnown RBP0.88□□□□□ -2.27
CALD1-219ENST00000480638 ARHGAP11BQ3KRB8 267 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 NSRP1Q9H0G5 558 aaKnown RBP0.88□□□□□ -2.27
CALD1-219ENST00000480638 OR52A5Q9H2C5 316 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 TREM1Q9NP99 234 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 TP53TG1Q9Y2A0 90 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 NHSL1Q5SYE7 1610 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 LAMA3Q16787 3333 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 TENM3Q9P273 2699 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 MXRA5Q9NR99 2828 aa0.88□□□□□ -2.27
CALD1-219ENST00000480638 USP34Q70CQ2 3546 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms