RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 SLC25A46Q96AG3 418 aa11.79□□□□□ -0.52
CDK9-203ENST00000480353 GPHA2Q96T91 129 aa11.79□□□□□ -0.52
CDK9-203ENST00000480353 ASCL2Q99929 193 aa11.79□□□□□ -0.52
CDK9-203ENST00000480353 FUNDC2Q9BWH2 189 aa11.79□□□□□ -0.52
CDK9-203ENST00000480353 TNCP24821 2201 aa11.79□□□□□ -0.52
CDK9-203ENST00000480353 PMP2P02689 132 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 PRH1P02810 166 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 DEFA4P12838 97 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 S100GP29377 79 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 SYNJ2BPP57105 145 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 ERVK-16P61578 105 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 VBP1P61758 197 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 NCS1P62166 190 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 RPL8P62917 257 aaKnown RBP11.78□□□□□ -0.52
CDK9-203ENST00000480353 DYRK1AQ13627 763 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 MRGPRG-AS1Q2M3A8 158 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 TTC9CQ8N5M4 171 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 DMBX1Q8NFW5 382 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 OR9G4Q8NGQ1 327 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 OR4A5Q8NH83 315 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 CD300LFQ8TDQ1 290 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 ZNF2Q9BSG1 426 aaPredicted RBP11.78□□□□□ -0.52
CDK9-203ENST00000480353 AKIP1Q9NQ31 210 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 ZNF257Q9Y2Q1 563 aa11.78□□□□□ -0.52
CDK9-203ENST00000480353 HMX3A6NHT5 357 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 FAM25AB3EWG3 89 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 FAM25CB3EWG5 89 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 FAM25GB3EWG6 89 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 OR2J3O76001 311 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 HPRT1P00492 218 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 NQO2P16083 231 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 TAS2R31P59538 309 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 TSPAN5P62079 268 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 EIF4EBP1Q13541 118 aaPredicted RBP11.77□□□□□ -0.53
CDK9-203ENST00000480353 FAM209BQ5JX69 171 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 MZT2AQ6P582 158 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 HAPLN4Q86UW8 402 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 CMTM1Q8IZ96 169 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 PUSL1Q8N0Z8 303 aaKnown RBP11.77□□□□□ -0.53
CDK9-203ENST00000480353 NECAP1Q8NC96 275 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 U3KQK5 164 aa11.77□□□□□ -0.53
CDK9-203ENST00000480353 H0Y980 276 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 HLA-GP17693 338 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 RFX2P48378 723 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 RORCP51449 518 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 KLF5Q13887 457 aaPredicted RBP11.76□□□□□ -0.53
CDK9-203ENST00000480353 C15orf32Q32M92 178 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 OR4A47Q6IF82 309 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 ZNF818PQ6ZRF7 136 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 OR6F1Q8NGZ6 308 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 AP3S1Q92572 193 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 WWC2-AS2Q96NR7 200 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 COMMD5Q9GZQ3 224 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 BET1LQ9NYM9 111 aa11.76□□□□□ -0.53
CDK9-203ENST00000480353 CYB5BO43169 146 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 RBFOX2O43251 390 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDK9-203ENST00000480353 TRBV12-3P01733 135 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 APOA1P02647 267 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 EIF4EP06730 217 aaKnown RBP11.75□□□□□ -0.53
CDK9-203ENST00000480353 HLA-DMAP28067 261 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 SNX29P2Q8IUI4 249 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 SGPP2Q8IWX5 399 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 CMTM3Q96MX0 182 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 FBXL7Q9UJT9 491 aa11.75□□□□□ -0.53
CDK9-203ENST00000480353 NPIPB5A8MRT5 1133 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 IGLV1-51P01701 117 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 RLN1P04808 185 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
CDK9-203ENST00000480353 PSMB6P28072 239 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 HRH1P35367 487 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 ZNF45Q02386 682 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 LCN12Q6JVE5 192 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 LPCAT3Q6P1A2 487 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 DHRS11Q6UWP2 260 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 EEF1AKMT3Q96AZ1 226 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 MOB3AQ96BX8 217 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 SCPEP1Q9HB40 452 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 COMMD9Q9P000 198 aa11.74□□□□□ -0.53
CDK9-203ENST00000480353 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.73□□□□□ -0.53
CDK9-203ENST00000480353 TRBV9A0A0B4J1U6 114 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 TEX22C9J3V5 150 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 GPR31O00270 319 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 HPGDSO60760 199 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 REG1AP05451 166 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 IL6RP08887 468 aaPredicted RBP11.73□□□□□ -0.53
CDK9-203ENST00000480353 RPA2P15927 270 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 GNRHRP30968 328 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 BRWD1-AS2P59051 145 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 GTSCR1Q86UQ5 136 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 DYNLRB2Q8TF09 96 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 ZMAT4Q9H898 229 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 PLEKHA2Q9HB19 425 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 TMEM140Q9NV12 185 aa11.73□□□□□ -0.53
CDK9-203ENST00000480353 TRIM64CA6NLI5 447 aa11.72□□□□□ -0.53
CDK9-203ENST00000480353 GGCTO75223 188 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms