RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 HNF4GQ14541 408 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 NMSQ5H8A3 153 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 FOXRED2Q8IWF2 684 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 DMBX1Q8NFW5 382 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 OR2A7Q96R45 310 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 PRR13Q9NZ81 148 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 METTL1Q9UBP6 276 aaKnown RBP9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 SIGLEC9Q9Y336 463 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 MMP24Q9Y5R2 645 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 ALG5Q9Y673 324 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 CUBNO60494 3623 aa9.98□□□□□ -0.81
TRAPPC12-218ENST00000479897 A0A0G2JRQ6 117 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 GPR137BO60478 399 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 AMY1AP04745 511 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 SLC25A6P12236 298 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 MRGPRG-AS1Q2M3A8 158 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 Q6ZNX1 250 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 SSX9Q7RTT3 188 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 H2BFWTQ7Z2G1 175 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 LYZL2Q7Z4W2 148 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 PPP1R27Q86WC6 154 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 VKORC1L1Q8N0U8 176 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 RRNAD1Q96FB5 475 aaKnown RBP9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 OR51J1Q9H342 316 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 FBXL15Q9H469 300 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 RANBP3Q9H6Z4 567 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 COA4Q9NYJ1 87 aa9.97□□□□□ -0.81
TRAPPC12-218ENST00000479897 C15orf61A6NNL5 157 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 NCBP2LA6PVI3 153 aaKnown RBP9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 UPK2O00526 184 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 PLXNB1O43157 2135 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 OR9G9P0C7N8 305 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 HLA-GP17693 338 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 MAS1LP35410 378 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 RELBQ01201 579 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 PRSS8Q16651 343 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 ZNF429Q86V71 674 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 MMD2Q8IY49 270 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 RASL11BQ9BPW5 248 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 NPFFR1Q9GZQ6 430 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 TPSG1Q9NRR2 321 aa9.96□□□□□ -0.82
TRAPPC12-218ENST00000479897 TET2Q6N021 2002 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 A0A1B0GU03 582 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 RPL8P62917 257 aaKnown RBP9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 SSBP2P81877 361 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 PLGLAQ15195 96 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 GGNBP1Q5YKI7 109 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 LIN54Q6MZP7 749 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 Q8N2B8 174 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 OR5M8Q8NGP6 311 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 RNASE11Q8TAA1 199 aaKnown RBP9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 GPR146Q96CH1 333 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 SPIN2AQ99865 258 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 SPIN2BQ9BPZ2 258 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 ZNF430Q9H8G1 570 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 TMEM14BQ9NUH8 114 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 CACFD1Q9UGQ2 172 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 ZNF580Q9UK33 172 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 PRNDQ9UKY0 176 aa9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 FOXA2Q9Y261 457 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC12-218ENST00000479897 IGHV7-81A0A0B4J1V7 117 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 TRAV3A0A0B4J244 114 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 TRIM77I1YAP6 450 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 KCNAB3O43448 404 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 ADAP1O75689 374 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 CA2P00918 260 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 IFNA21P01568 189 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 IGHG2P01859 326 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 HOXB5P09067 269 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 SULT1A3P0DMM9 295 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 SULT1A4P0DMN0 295 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 SMCO1Q147U7 214 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 ZNF562Q6V9R5 426 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 OR5B3Q8NH48 314 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 TNFRSF19Q9NS68 423 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 FKBP11Q9NYL4 201 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 CACNG5Q9UF02 275 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 ZNF257Q9Y2Q1 563 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 C2CD3Q4AC94 2353 aa9.94□□□□□ -0.82
TRAPPC12-218ENST00000479897 FAM181BA6NEQ2 426 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 SSNA1O43805 119 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 PITX3O75364 302 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 TSPAN9O75954 239 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 SNAPC5O75971 98 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 COMPP49747 757 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 CRIP2P52943 208 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 NDPQ00604 133 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 PJVKQ0ZLH3 352 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 PDLIM3Q53GG5 364 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 THOC7Q6I9Y2 204 aaKnown RBP9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 Q6ZRM9 215 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 OR52E5Q8NH55 327 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 OR4A16Q8NH70 328 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 PRSS22Q9GZN4 317 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 ZNF702PQ9H963 129 aa9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC12-218ENST00000479897 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.82
TRAPPC12-218ENST00000479897 FAM90A26D6RGX4 464 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms