RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 MMD2Q8IY49 270 aa11.97□□□□□ -0.49
COL16A1-211ENST00000479100 ADAD2Q8NCV1 583 aaKnown RBP11.97□□□□□ -0.49
COL16A1-211ENST00000479100 VSTM2AQ8TAG5 236 aa11.97□□□□□ -0.49
COL16A1-211ENST00000479100 ARPC1AQ92747 370 aa11.97□□□□□ -0.49
COL16A1-211ENST00000479100 CITED1Q99966 193 aa11.97□□□□□ -0.49
COL16A1-211ENST00000479100 ZNF430Q9H8G1 570 aaPredicted RBP11.97□□□□□ -0.49
COL16A1-211ENST00000479100 COMMD9Q9P000 198 aa11.97□□□□□ -0.49
COL16A1-211ENST00000479100 G3V318 75 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 H0Y980 276 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 ARPC1BO15143 372 aaKnown RBP11.96□□□□□ -0.49
COL16A1-211ENST00000479100 CREBL2O60519 120 aaPredicted RBP11.96□□□□□ -0.49
COL16A1-211ENST00000479100 KBTBD11O94819 623 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 KRASP01116 189 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 IGF1P05019 195 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 AKR1C4P17516 323 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 CD40LGP29965 261 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 G6PCP35575 357 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 TRIM16LQ309B1 348 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 TMED4Q7Z7H5 227 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.49
COL16A1-211ENST00000479100 OR4X2Q8NGF9 303 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 TP53RKQ96S44 253 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 C7orf50Q9BRJ6 194 aaKnown RBP11.96□□□□□ -0.49
COL16A1-211ENST00000479100 GON7Q9BXV9 100 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 NAA60Q9H7X0 242 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 FBXO7Q9Y3I1 522 aa11.96□□□□□ -0.49
COL16A1-211ENST00000479100 TCRBV4S1A1TA0A5B7 111 aa11.95□□□□□ -0.5
COL16A1-211ENST00000479100 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
COL16A1-211ENST00000479100 TMEM267Q0VDI3 215 aaPredicted RBP11.95□□□□□ -0.5
COL16A1-211ENST00000479100 MRGPRG-AS1Q2M3A8 158 aa11.95□□□□□ -0.5
COL16A1-211ENST00000479100 UNQ5815/PRO19632Q6UWF5 114 aa11.95□□□□□ -0.5
COL16A1-211ENST00000479100 SGPP2Q8IWX5 399 aa11.95□□□□□ -0.5
COL16A1-211ENST00000479100 PHB2Q99623 299 aa11.95□□□□□ -0.5
COL16A1-211ENST00000479100 SLC25A21Q9BQT8 299 aaPredicted RBP11.95□□□□□ -0.5
COL16A1-211ENST00000479100 FAM212BQ9NTI7 297 aaPredicted RBP11.95□□□□□ -0.5
COL16A1-211ENST00000479100 TMEM140Q9NV12 185 aa11.95□□□□□ -0.5
COL16A1-211ENST00000479100 PRKDCP78527 4128 aaKnown RBP11.94□□□□□ -0.5
COL16A1-211ENST00000479100 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 A0A1W2PRX2 142 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 CRYM-AS1A6NIL9 109 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 PLXNB1O43157 2135 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 APELAP0DMC3 54 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 EGR2P11161 476 aaPredicted RBP11.94□□□□□ -0.5
COL16A1-211ENST00000479100 SSBP2P81877 361 aaPredicted RBP11.94□□□□□ -0.5
COL16A1-211ENST00000479100 RBMS2Q15434 407 aaKnown RBP11.94□□□□□ -0.5
COL16A1-211ENST00000479100 POU2AF1Q16633 256 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 NSUN5P1Q3KNT7 163 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 LFNGQ8NES3 379 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 OR4A5Q8NH83 315 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 WIPF2Q8TF74 440 aaPredicted RBP11.94□□□□□ -0.5
COL16A1-211ENST00000479100 CITED2Q99967 270 aaPredicted RBP11.94□□□□□ -0.5
COL16A1-211ENST00000479100 BET1LQ9NYM9 111 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 KCNIP3Q9Y2W7 256 aa11.94□□□□□ -0.5
COL16A1-211ENST00000479100 A0A1W2PN81 502 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 MSGN1A6NI15 193 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 UPK2O00526 184 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 PLA2G10O15496 165 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 LYRM1O43325 122 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 SNAPC5O75971 98 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 IGKV1-39P01597 117 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 OPN1MWP04001 364 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 IGKV1D-39P04432 117 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 OPN1MW2P0DN77 364 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 OPN1MW3P0DN78 364 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 MYOD1P15172 320 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 CHRNA7P36544 502 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 RPL8P62917 257 aaKnown RBP11.93□□□□□ -0.5
COL16A1-211ENST00000479100 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 TEX38Q6PEX7 206 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 TREML4Q6UXN2 200 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 H2BFWTQ7Z2G1 175 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 RNASE11Q8TAA1 199 aaKnown RBP11.93□□□□□ -0.5
COL16A1-211ENST00000479100 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
COL16A1-211ENST00000479100 TMEM230Q96A57 120 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 FYTTD1Q96QD9 318 aaKnown RBP11.93□□□□□ -0.5
COL16A1-211ENST00000479100 NUBP2Q9Y5Y2 271 aa11.93□□□□□ -0.5
COL16A1-211ENST00000479100 B3GALNT1O75752 331 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 ATG12O94817 140 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 NDUFB6O95139 128 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 PF4V1P10720 104 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 HLA-GP17693 338 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 UCP1P25874 307 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 MAS1LP35410 378 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 RPL27AP46776 148 aaKnown RBP11.92□□□□□ -0.5
COL16A1-211ENST00000479100 AKR1C2P52895 323 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 DHODHQ02127 395 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 TCTEX1D4Q5JR98 221 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 TMEM65Q6PI78 240 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 LCNL1Q6ZST4 164 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 COMMD1Q8N668 190 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 OR5T1Q8NG75 326 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 TMEM222Q9H0R3 208 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 ZNF580Q9UK33 172 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 FOXA2Q9Y261 457 aaPredicted RBP11.92□□□□□ -0.5
COL16A1-211ENST00000479100 NSG2Q9Y328 171 aa11.92□□□□□ -0.5
COL16A1-211ENST00000479100 UPK1BO75841 260 aa11.91□□□□□ -0.5
COL16A1-211ENST00000479100 IGHG4P01861 327 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms