RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 OR4A5Q8NH83 315 aa21.02■□□□□ 0.96
CCM2-211ENST00000478582 ARPC1AQ92747 370 aa21.02■□□□□ 0.96
CCM2-211ENST00000478582 ZNF430Q9H8G1 570 aaPredicted RBP21.02■□□□□ 0.96
CCM2-211ENST00000478582 TET2Q6N021 2002 aaPredicted RBP21.02■□□□□ 0.96
CCM2-211ENST00000478582 TRAV41A0A0B4J266 112 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 H0Y980 276 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 B3GALNT1O75752 331 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 KBTBD11O94819 623 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 CD40LGP29965 261 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 PPIFP30405 207 aaKnown RBP21.01■□□□□ 0.95
CCM2-211ENST00000478582 C2orf68Q2NKX9 166 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 TCTEX1D4Q5JR98 221 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 OR4A47Q6IF82 309 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 C11orf44Q8N8P7 122 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 R3HDM4Q96D70 268 aa21.01■□□□□ 0.95
CCM2-211ENST00000478582 C7orf50Q9BRJ6 194 aaKnown RBP21.01■□□□□ 0.95
CCM2-211ENST00000478582 C3orf85A0A1B0GTC6 90 aa21■□□□□ 0.95
CCM2-211ENST00000478582 CNIH1O95406 144 aa21■□□□□ 0.95
CCM2-211ENST00000478582 TMEM267Q0VDI3 215 aaPredicted RBP21■□□□□ 0.95
CCM2-211ENST00000478582 AKIRIN2Q53H80 203 aa21■□□□□ 0.95
CCM2-211ENST00000478582 TEX38Q6PEX7 206 aa21■□□□□ 0.95
CCM2-211ENST00000478582 SSX9Q7RTT3 188 aa21■□□□□ 0.95
CCM2-211ENST00000478582 MINDY2Q8NBR6 621 aa21■□□□□ 0.95
CCM2-211ENST00000478582 SLC25A21Q9BQT8 299 aaPredicted RBP21■□□□□ 0.95
CCM2-211ENST00000478582 VSIG4Q9Y279 399 aa21■□□□□ 0.95
CCM2-211ENST00000478582 WSB1Q9Y6I7 421 aa21■□□□□ 0.95
CCM2-211ENST00000478582 G3V318 75 aa20.99■□□□□ 0.95
CCM2-211ENST00000478582 IGHG4P01861 327 aa20.99■□□□□ 0.95
CCM2-211ENST00000478582 FGF2P09038 288 aa20.99■□□□□ 0.95
CCM2-211ENST00000478582 RPA2P15927 270 aa20.99■□□□□ 0.95
CCM2-211ENST00000478582 MAS1LP35410 378 aa20.99■□□□□ 0.95
CCM2-211ENST00000478582 TP53RKQ96S44 253 aa20.99■□□□□ 0.95
CCM2-211ENST00000478582 MARCH11A6NNE9 402 aa20.98■□□□□ 0.95
CCM2-211ENST00000478582 TSPAN15O95858 294 aa20.98■□□□□ 0.95
CCM2-211ENST00000478582 GNB1P62873 340 aa20.98■□□□□ 0.95
CCM2-211ENST00000478582 TNXAQ16473 311 aa20.98■□□□□ 0.95
CCM2-211ENST00000478582 RNF152Q8N8N0 203 aa20.98■□□□□ 0.95
CCM2-211ENST00000478582 DMBX1Q8NFW5 382 aa20.98■□□□□ 0.95
CCM2-211ENST00000478582 ABHD5Q8WTS1 349 aa20.98■□□□□ 0.95
CCM2-211ENST00000478582 CITED2Q99967 270 aaPredicted RBP20.98■□□□□ 0.95
CCM2-211ENST00000478582 FAM103A1Q9BTL3 118 aaKnown RBP20.98■□□□□ 0.95
CCM2-211ENST00000478582 WDR12Q9GZL7 423 aaKnown RBP20.98■□□□□ 0.95
CCM2-211ENST00000478582 CRYM-AS1A6NIL9 109 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 CENPXA8MT69 81 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 UPK2O00526 184 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 SERPINE2P07093 398 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 ELANEP08246 267 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 ERVK-16P61578 105 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 FOXE3Q13461 319 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 ZNF846Q147U1 533 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 NDUFA11Q86Y39 141 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 GRPEL2Q8TAA5 225 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 TMEM68Q96MH6 324 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 NAA60Q9H7X0 242 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 TMEM140Q9NV12 185 aa20.97■□□□□ 0.95
CCM2-211ENST00000478582 ACTL6BO94805 426 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 KRASP01116 189 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 IGKV1-39P01597 117 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 IGLV1-40P01703 118 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 OPN1MWP04001 364 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 IGKV1D-39P04432 117 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 OPN1MW2P0DN77 364 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 OPN1MW3P0DN78 364 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 UCP1P25874 307 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 ECSCRQ19T08 205 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 LFNGQ8NES3 379 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 SRSF12Q8WXF0 261 aaKnown RBP20.96■□□□□ 0.95
CCM2-211ENST00000478582 SEC22AQ96IW7 307 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 PLXNB1O43157 2135 aa20.96■□□□□ 0.95
CCM2-211ENST00000478582 TEX13DA0A0J9YY54 714 aaPredicted RBP20.95■□□□□ 0.94
CCM2-211ENST00000478582 TCRBV4S1A1TA0A5B7 111 aa20.95■□□□□ 0.94
CCM2-211ENST00000478582 PSMB8P28062 276 aa20.95■□□□□ 0.94
CCM2-211ENST00000478582 G6PCP35575 357 aa20.95■□□□□ 0.94
CCM2-211ENST00000478582 RPL8P62917 257 aaKnown RBP20.95■□□□□ 0.94
CCM2-211ENST00000478582 HIST2H2BDQ6DRA6 164 aa20.95■□□□□ 0.94
CCM2-211ENST00000478582 UNQ5815/PRO19632Q6UWF5 114 aa20.95■□□□□ 0.94
CCM2-211ENST00000478582 ADAD2Q8NCV1 583 aaKnown RBP20.95■□□□□ 0.94
CCM2-211ENST00000478582 TMEM230Q96A57 120 aa20.95■□□□□ 0.94
CCM2-211ENST00000478582 FOXA2Q9Y261 457 aaPredicted RBP20.95■□□□□ 0.94
CCM2-211ENST00000478582 TSSC4Q9Y5U2 329 aaPredicted RBP20.95■□□□□ 0.94
CCM2-211ENST00000478582 LINC00854A0A1B0GVQ3 168 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 MSGN1A6NI15 193 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 ADARB2-AS1A8MUL3 147 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 PLA2G10O15496 165 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 RBMS2Q15434 407 aaKnown RBP20.94■□□□□ 0.94
CCM2-211ENST00000478582 FAM110DQ8TAY7 271 aaPredicted RBP20.94■□□□□ 0.94
CCM2-211ENST00000478582 GALNT14Q96FL9 552 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 TMEM222Q9H0R3 208 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 ZFP57Q9NU63 452 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 VWFP04275 2813 aa20.94■□□□□ 0.94
CCM2-211ENST00000478582 TRAV3A0A0B4J244 114 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 HLA-GP17693 338 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 BTCP35070 178 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 CCR6P51684 374 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 DHODHQ02127 395 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 SP6Q3SY56 376 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 ASPHD1Q5U4P2 390 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 SGPP2Q8IWX5 399 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 OR5M8Q8NGP6 311 aa20.93■□□□□ 0.94
CCM2-211ENST00000478582 GLYATL2Q8WU03 294 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms