RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 LPAR6P43657 344 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 CRIP2P52943 208 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-222ENST00000478095 RPL23AP62750 156 aaKnown RBP8.03□□□□□ -1.12
HDAC6-222ENST00000478095 FOXE3Q13461 319 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 C19orf54Q5BKX5 351 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 CXorf66Q5JRM2 361 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-222ENST00000478095 PUSL1Q8N0Z8 303 aaKnown RBP8.03□□□□□ -1.12
HDAC6-222ENST00000478095 MINDY2Q8NBR6 621 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 OR51S1Q8NGJ8 323 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 OR13C8Q8NGS7 320 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 TERB2Q8NHR7 220 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 OR2A7Q96R45 310 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 PHB2Q99623 299 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 SRRQ9GZT4 340 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 KLK15Q9H2R5 256 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 MCUBQ9NWR8 336 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 FOXA2Q9Y261 457 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-222ENST00000478095 NUBP2Q9Y5Y2 271 aa8.03□□□□□ -1.12
HDAC6-222ENST00000478095 TRAV3A0A0B4J244 114 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 ACTL6BO94805 426 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 HPRT1P00492 218 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 ELANEP08246 267 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 MYOD1P15172 320 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 NQO2P16083 231 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 F2RP25116 425 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 PTBP1P26599 531 aaKnown RBP eCLIP8.02□□□□□ -1.13
HDAC6-222ENST00000478095 PSMB8P28062 276 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 ETV6P41212 452 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 PIGPP57054 158 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 TAS2R31P59538 309 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 TMEM267Q0VDI3 215 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-222ENST00000478095 KLF9Q13886 244 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-222ENST00000478095 CNPY1Q3B7I2 92 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 ZNF585BQ52M93 769 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 ASPHD1Q5U4P2 390 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 OR4A47Q6IF82 309 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 TMEM65Q6PI78 240 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 C8orf86Q6ZUL3 223 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 MMD2Q8IY49 270 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 TOMM5Q8N4H5 51 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 KLHL30-AS1Q8NEE0 82 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 DMBX1Q8NFW5 382 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 OR4F17Q8NGA8 305 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 VSTM2AQ8TAG5 236 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 TMEM167AQ8TBQ9 72 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 CD300LFQ8TDQ1 290 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 SRSF12Q8WXF0 261 aaKnown RBP8.02□□□□□ -1.13
HDAC6-222ENST00000478095 DUX3Q96PT4 197 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 OR4F4Q96R69 305 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 PLEKHA2Q9HB19 425 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 HRASLSQ9HDD0 168 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 TMEM140Q9NV12 185 aa8.02□□□□□ -1.13
HDAC6-222ENST00000478095 TRRAPQ9Y4A5 3859 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 MSGN1A6NI15 193 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 MARCH11A6NNE9 402 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 MPPED1O15442 326 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 CREBL2O60519 120 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-222ENST00000478095 KRASP01116 189 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 IGLV1-40P01703 118 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 CTSDP07339 412 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-222ENST00000478095 G6PCP35575 357 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 ERVK-16P61578 105 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 DEFA5Q01523 94 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 BAK1Q16611 211 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 DEFB136Q30KP8 78 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 TCTEX1D1Q8N7M0 179 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 OR5T1Q8NG75 326 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 ZFAND1Q8TCF1 268 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 ZNF486Q96H40 463 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-222ENST00000478095 MS4A10Q96PG2 267 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 OR5B12Q96R08 314 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 TP53RKQ96S44 253 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 PRRT1Q99946 306 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 ZNF355PQ9NSJ1 428 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 COMMD9Q9P000 198 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 COPZ2Q9P299 210 aa8.01□□□□□ -1.13
HDAC6-222ENST00000478095 C3orf85A0A1B0GTC6 90 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 LINC00854A0A1B0GVQ3 168 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 HMX3A6NHT5 357 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 IGKV1-39P01597 117 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 PF4P02776 101 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 IGKV1D-39P04432 117 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 HLA-GP17693 338 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 FAUP35544 74 aaKnown RBP8□□□□□ -1.13
HDAC6-222ENST00000478095 RPL27AP46776 148 aaKnown RBP8□□□□□ -1.13
HDAC6-222ENST00000478095 INPP1P49441 399 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 RAB9AP51151 201 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 AP3S2P59780 193 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 RND3P61587 244 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 RPL8P62917 257 aaKnown RBP8□□□□□ -1.13
HDAC6-222ENST00000478095 SP6Q3SY56 376 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 AKIRIN2Q53H80 203 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 TRIQKQ629K1 86 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 ZNF57Q68EA5 555 aaPredicted RBP8□□□□□ -1.13
HDAC6-222ENST00000478095 ZNF695Q8IW36 515 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 RNF152Q8N8N0 203 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 CCDC71LQ8N9Z2 235 aa8□□□□□ -1.13
HDAC6-222ENST00000478095 FYTTD1Q96QD9 318 aaKnown RBP8□□□□□ -1.13
HDAC6-222ENST00000478095 SDHCQ99643 169 aaPredicted RBP8□□□□□ -1.13
HDAC6-222ENST00000478095 RTBDNQ9BSG5 229 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms