RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SPINK14Q6IE38 97 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 GGTLC1Q9BX51 225 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 MRPL18Q9H0U6 180 aaKnown RBP11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 CXXC4Q9H2H0 198 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 NPVFQ9HCQ7 196 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 SLC25A10Q9UBX3 287 aaPredicted RBP11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 CNTRLQ7Z7A1 2325 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 TRAV38-1A0A0B4J264 116 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 PSPNO60542 156 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNF25P17030 456 aaPredicted RBP11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 VDAC2P45880 294 aaPredicted RBP11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 EDDM3BP56851 147 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 UBE2G2P60604 165 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 RPEL1Q2QD12 228 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 TMEM251Q8N6I4 163 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR4A16Q8NH70 328 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 VAMP8Q9BV40 100 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 JPT1Q9UK76 154 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 KLF13Q9Y2Y9 288 aaPredicted RBP11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 LSM4Q9Y4Z0 139 aaKnown RBP11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 DOCK10Q96BY6 2186 aa11.26□□□□□ -0.61
HLA-DMA-208ENST00000477541 GCN1Q92616 2671 aaKnown RBP11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 PTPRBP23467 1997 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 FLNBO75369 2602 aaKnown RBP11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 TRBV20OR9-2A0A075B6H5 130 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 ITGB1BP1O14713 200 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 GCHFRP30047 84 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 MAGEA5P43359 124 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 PRSS8Q16651 343 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 SMIM21Q3B7S5 101 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 PRAMEF6Q5VXH4 476 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 INO80CQ6PI98 192 aaPredicted RBP11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNF705AQ6ZN79 300 aaPredicted RBP11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 ACP7Q6ZNF0 438 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 Q6ZWC4 215 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 C1orf174Q8IYL3 243 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNF114Q8NC26 417 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 OCC1Q8TAD7 63 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 SDSLQ96GA7 329 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 COQ2Q96H96 371 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 MGST2Q99735 147 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 DERL1Q9BUN8 251 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 GOLT1BQ9Y3E0 138 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 LOXL2Q9Y4K0 774 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 GTF3C1Q12789 2109 aa11.25□□□□□ -0.61
HLA-DMA-208ENST00000477541 COL27A1Q8IZC6 1860 aaPredicted RBP11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 LNP1A1A4G5 178 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 LINC00473A8K010 186 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 CFIP05156 583 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 CELA3AP09093 270 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 ACP1P24666 158 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 GABRA2P47869 451 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 ATP5IP56385 69 aaPredicted RBP11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 RNF2Q99496 336 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR2J1Q9GZK6 312 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 RAB9BQ9NP90 201 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 ZNF586Q9NXT0 402 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 USF3Q68DE3 2245 aa11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 ASH1LQ9NR48 2969 aaKnown RBP11.24□□□□□ -0.61
HLA-DMA-208ENST00000477541 SCO2A0A1W2PP80 73 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 C21orf140B9A014 251 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 KLRC4-KLRK1H3BQV0 150 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 SFTPCP11686 197 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 BRS3P32247 399 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 GPR12P47775 334 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 BAGE3Q86Y29 109 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 BAGE2Q86Y30 109 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 FAM90A1Q86YD7 464 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 GCNT2Q8N0V5 402 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR1L6Q8NGR2 347 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 SLC25A40Q8TBP6 338 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 RBM14Q96PK6 669 aaKnown RBP11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 OPN3Q9H1Y3 402 aaPredicted RBP11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 PATZ1Q9HBE1 687 aaKnown RBP11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 OSTCQ9NRP0 149 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 TP53TG3Q9ULZ0 132 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 CBY1Q9Y3M2 126 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 PCSK5Q92824 1860 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 YLPM1P49750 1951 aaKnown RBP11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 TMEM8BA6NDV4 472 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 FAM166BA8MTA8 275 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 NUPR1O60356 82 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 SERF1AO75920 110 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR5G3P0C626 314 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 OR9G9P0C7N8 305 aa11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
HLA-DMA-208ENST00000477541 AESQ08117 197 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms