RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 ITGB1BP1O14713 200 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 NPFFO15130 113 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 CHST1O43916 411 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 SSSCA1O60232 199 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 YPEL1O60688 119 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 ARG1P05089 322 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 SPP1P10451 314 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 CAV2P51636 162 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 AKR1C2P52895 323 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 TAS2R30P59541 319 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 BPIFB3P59826 476 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 NHLH2Q02577 135 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 PJVKQ0ZLH3 352 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 EIF4EBP1Q13541 118 aaPredicted RBP13.66□□□□□ -0.22
EPHB4-204ENST00000477446 MORN2Q502X0 79 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 OR9G1Q8NH87 305 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 YPEL2Q96QA6 119 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 HSD17B10Q99714 261 aaKnown RBP13.66□□□□□ -0.22
EPHB4-204ENST00000477446 OR2D2Q9H210 308 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 STRAPQ9Y3F4 350 aaKnown RBP13.66□□□□□ -0.22
EPHB4-204ENST00000477446 MMP24Q9Y5R2 645 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 SOX21Q9Y651 276 aaPredicted RBP13.66□□□□□ -0.22
EPHB4-204ENST00000477446 WSB1Q9Y6I7 421 aa13.66□□□□□ -0.22
EPHB4-204ENST00000477446 MXRA5Q9NR99 2828 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 NAV3Q8IVL0 2385 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 CRLF1O75462 422 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 IGKV1-39P01597 117 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 IGLV1-47P01700 117 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 IGKV1D-39P04432 117 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 SRD5A1P18405 259 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 EPHA1P21709 976 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 PPP1CCP36873 323 aaKnown RBP13.65□□□□□ -0.22
EPHB4-204ENST00000477446 GNG10P50151 68 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 F2RL1P55085 397 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 BCL6BQ8N143 479 aaPredicted RBP13.65□□□□□ -0.22
EPHB4-204ENST00000477446 COMMD1Q8N668 190 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 CD300LFQ8TDQ1 290 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 C22orf15Q8WYQ4 148 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 MS4A7Q9GZW8 240 aaPredicted RBP13.65□□□□□ -0.22
EPHB4-204ENST00000477446 PARP12Q9H0J9 701 aaKnown RBP13.65□□□□□ -0.22
EPHB4-204ENST00000477446 ZNRD1Q9P1U0 126 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 GAB2Q9UQC2 676 aa13.65□□□□□ -0.22
EPHB4-204ENST00000477446 A0A1W2PPE3 182 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 J3QR06 171 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 TOR1AO14656 332 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 FBXO24O75426 580 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 MED6O75586 246 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 SAA4P35542 130 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 LPAR6P43657 344 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 ZNF134P52741 427 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 PRRX1P54821 245 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 MIDNQ504T8 468 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 PXDC1Q5TGL8 231 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 C9orf139Q6ZV77 190 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 ZNF439Q8NDP4 499 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 WFDC1Q9HC57 220 aa13.64□□□□□ -0.23
EPHB4-204ENST00000477446 IGSF23A1L1A6 192 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 TRIM77I1YAP6 450 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 DFFBO76075 338 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 LGALS4P56470 323 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 Q3ZCU0 254 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 LDLRAD2Q5SZI1 272 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 STX12Q86Y82 276 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 SPAG16Q8N0X2 631 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 BEND2Q8NDZ0 799 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 OR4P4Q8NGL7 312 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 LYPD6BQ8NI32 183 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 ZNF596Q8TC21 504 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 MAGT1Q9H0U3 335 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 CACNG5Q9UF02 275 aa13.63□□□□□ -0.23
EPHB4-204ENST00000477446 A0A0G2JRQ6 117 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 A0A0U1RQK1 487 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 SLC31A2O15432 143 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 SYNGR2O43760 224 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 ARHGDIBP52566 201 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 CT45A1Q5HYN5 189 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 BTNL8Q6UX41 500 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 SLC25A48Q6ZT89 311 aaKnown RBP13.62□□□□□ -0.23
EPHB4-204ENST00000477446 LHFPL4Q7Z7J7 247 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 C8orf31Q8N9H6 132 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 BPIFCQ8NFQ6 507 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 CT45A3Q8NHU0 189 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 C17orf50Q8WW18 174 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 GNPNAT1Q96EK6 184 aaPredicted RBP13.62□□□□□ -0.23
EPHB4-204ENST00000477446 BSCL2Q96G97 398 aaPredicted RBP13.62□□□□□ -0.23
EPHB4-204ENST00000477446 AJUBAQ96IF1 538 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 RNF150Q9ULK6 438 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 TMEM218A2RU14 115 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 UMAD1C9J7I0 102 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 RAB7AP51149 207 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 PAX9P55771 341 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 LINC00311Q8N616 119 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 AGMATQ9BSE5 352 aa13.62□□□□□ -0.23
EPHB4-204ENST00000477446 TBL2Q9Y4P3 447 aaKnown RBP13.62□□□□□ -0.23
EPHB4-204ENST00000477446 ZFHX3Q15911 3703 aa13.61□□□□□ -0.23
EPHB4-204ENST00000477446 BUB1B-PAK6H3BSN5 160 aa13.61□□□□□ -0.23
EPHB4-204ENST00000477446 RAB29O14966 203 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms