RNA–Protein interactions for RNA: ENST00000476519.1

SYNE1-223, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 582 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-223ENST00000476519 RBMXL2O75526 392 aaKnown RBP9.22□□□□□ -0.93
SYNE1-223ENST00000476519 PTHLHP12272 177 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 SYNJ2BPP57105 145 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 TAS2R31P59538 309 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 RPEL1Q2QD12 228 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 TMEM69Q5SWH9 247 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 IL34Q6ZMJ4 242 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 SPAG16Q8N0X2 631 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 SAMD12Q8N8I0 201 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 SLC25A46Q96AG3 418 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 CMTM3Q96MX0 182 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 BET1LQ9NYM9 111 aa9.22□□□□□ -0.93
SYNE1-223ENST00000476519 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.21□□□□□ -0.94
SYNE1-223ENST00000476519 SMIM31A0A1B0GVY4 71 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 DPPA5A6NC42 116 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 TEX22C9J3V5 150 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 TNFSF12O43508 249 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 DHFRP00374 187 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 HPRT1P00492 218 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 TRBV12-3P01733 135 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 CRYGCP07315 174 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 IL6RP08887 468 aaPredicted RBP9.21□□□□□ -0.94
SYNE1-223ENST00000476519 ZNF735P0CB33 412 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 NQO2P16083 231 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 HLA-GP17693 338 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 NAT1P18440 290 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 PRSS3P35030 304 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 RPL27AP46776 148 aaKnown RBP9.21□□□□□ -0.94
SYNE1-223ENST00000476519 TAS2R46P59540 309 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 LSM3P62310 102 aaKnown RBP9.21□□□□□ -0.94
SYNE1-223ENST00000476519 RPL8P62917 257 aaKnown RBP9.21□□□□□ -0.94
SYNE1-223ENST00000476519 ZNF45Q02386 682 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 CATR1Q13166 79 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 POU2AF1Q16633 256 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 KLK9Q2XQG4 91 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 C10orf55Q5SWW7 151 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 ASCL2Q99929 193 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 RSRP1Q9BUV0 290 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 PLEKHA2Q9HB19 425 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 IFT46Q9NQC8 304 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 ADAM30Q9UKF2 790 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 KLK9Q9UKQ9 250 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 ANAPC10Q9UM13 185 aa9.21□□□□□ -0.94
SYNE1-223ENST00000476519 HMX3A6NHT5 357 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 A8MZ25 164 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 E7EUB6 86 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 SULT1C2O00338 296 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 APOA1P02647 267 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 PRH1P02810 166 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 FCER2P06734 321 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 FGF2P09038 288 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 GNRHRP30968 328 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 TGFBR1P36897 503 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 RFX2P48378 723 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 TAS2R20P59543 309 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 FXYD4P59646 89 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 HERV-K104P61576 105 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 C15orf32Q32M92 178 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 OR4A47Q6IF82 309 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 CADM3Q8N126 398 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 Q8N1Y9 231 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 FYTTD1Q96QD9 318 aaKnown RBP9.2□□□□□ -0.94
SYNE1-223ENST00000476519 GPHA2Q96T91 129 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 SRSF8Q9BRL6 282 aaKnown RBP9.2□□□□□ -0.94
SYNE1-223ENST00000476519 EHFQ9NZC4 300 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 PEMTQ9UBM1 199 aa9.2□□□□□ -0.94
SYNE1-223ENST00000476519 MEIS3P1A6NDR6 274 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 BMPR1BO00238 502 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 OR2J3O76001 311 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 CSN3P07498 182 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 HIST1H1BP16401 226 aaKnown RBP9.19□□□□□ -0.94
SYNE1-223ENST00000476519 PSMB6P28072 239 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 MECP2P51608 486 aaKnown RBP9.19□□□□□ -0.94
SYNE1-223ENST00000476519 EXOSC2Q13868 293 aaKnown RBP9.19□□□□□ -0.94
SYNE1-223ENST00000476519 ZNF818PQ6ZRF7 136 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 SSX9Q7RTT3 188 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 LYSMD2Q8IV50 215 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 SBSPONQ8IVN8 264 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 CMTM1Q8IZ96 169 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 OR5H2Q8NGV7 314 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 OR6F1Q8NGZ6 308 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 MOB3AQ96BX8 217 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 FUNDC2Q9BWH2 189 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 SCPEP1Q9HB40 452 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 HRASLSQ9HDD0 168 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 FBXL7Q9UJT9 491 aa9.19□□□□□ -0.94
SYNE1-223ENST00000476519 A0A1B0GW64 132 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 UPK2O00526 184 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 GGCTO75223 188 aaKnown RBP9.18□□□□□ -0.94
SYNE1-223ENST00000476519 PGLYRP1O75594 196 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-223ENST00000476519 PMP2P02689 132 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 FRMD6-AS1P0C7T7 363 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 CTRB1P17538 263 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 F2RP25116 425 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 RORCP51449 518 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 DEFA5Q01523 94 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 AADACL3Q5VUY0 350 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 CTRB2Q6GPI1 263 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
SYNE1-223ENST00000476519 TMEM17Q86X19 198 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms