RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TAC1P20366 129 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 HIST1H1TP22492 207 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 CPN2P22792 545 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 SERPINB1P30740 379 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 CASQ1P31415 396 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 KRTAP12-3P60328 96 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 PLGLB1Q02325 96 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 TFF3Q07654 80 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF791Q3KP31 576 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 KRTAP25-1Q3LHN0 102 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 LGALSLQ3ZCW2 172 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF404Q494X3 552 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 ATP6AP1LQ52LC2 224 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 TTMPQ5BVD1 217 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 C16orf87Q6PH81 154 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 LINC00596Q86U02 117 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 CTAGE3PQ8IX95 158 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 AMN1Q8IY45 258 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 ST13P4Q8IZP2 240 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 RPRMLQ8N4K4 120 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 TMEM251Q8N6I4 163 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 LY6G5BQ8NDX9 201 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 OR8A1Q8NGG7 326 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 DOK4Q8TEW6 326 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 ZCCHC13Q8WW36 166 aaKnown RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 CDKL2Q92772 493 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 BEX2Q9BXY8 128 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 TTTY12Q9BZ98 90 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 PROK2Q9HC23 129 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 SDHAF3Q9NRP4 125 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 MS4A12Q9NXJ0 267 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 OPTCQ9UBM4 332 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 UTP11Q9Y3A2 253 aaKnown RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 RNF11Q9Y3C5 154 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF706Q9Y5V0 76 aaPredicted RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 INTS1Q8N201 2190 aaKnown RBP2.2□□□□□ -2.06
PTCD3-211ENST00000476215 NUP210LQ5VU65 1888 aa2.2□□□□□ -2.06
PTCD3-211ENST00000476215 MPDZO75970 2070 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 NCOA6Q14686 2063 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-211ENST00000476215 NINQ8N4C6 2090 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 SVEP1Q4LDE5 3571 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 COL6A5A8TX70 2615 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 TRGV5A0A0B4J1U4 118 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 H0YC42 278 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 K7EN84 100 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 K7EPK0 472 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF593O00488 134 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-211ENST00000476215 ISLRO14498 428 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 TP53I11O14683 189 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 COX7A2P2O60397 106 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 EPPINO95925 133 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 OTCP00480 354 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 TRGV3P03979 118 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 CLPSP04118 112 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 CCL3P10147 92 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 PTHLHP12272 177 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 SSR2P43308 183 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 GPR4P46093 362 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 DNASE1L1P49184 302 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 XKP51811 444 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 RAP1GDS1P52306 607 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 FOXA1P55317 472 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 TNFRSF9Q07011 255 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 TMEM241Q24JQ0 296 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 ZNF773Q6PK81 442 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 SPNS3Q6ZMD2 512 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 LRRC25Q8N386 305 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-211ENST00000476215 OR7G1Q8NGA0 311 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 OR2K2Q8NGT1 345 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 KCTD4Q8WVF5 259 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 ANP32BQ92688 251 aaKnown RBP2.19□□□□□ -2.06
PTCD3-211ENST00000476215 SERPINI1Q99574 410 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 MAP1LC3CQ9BXW4 147 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 WDR55Q9H6Y2 383 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-211ENST00000476215 CXorf21Q9HAI6 301 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 FAM215AQ9Y5M1 114 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 CHCHD2Q9Y6H1 151 aaPredicted RBP2.19□□□□□ -2.06
PTCD3-211ENST00000476215 CPAMD8Q8IZJ3 1885 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 DNHD1Q96M86 4753 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 CACNA1CQ13936 2221 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 MED13LQ71F56 2210 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 TLN2Q9Y4G6 2542 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 ATRQ13535 2644 aa2.19□□□□□ -2.06
PTCD3-211ENST00000476215 NSD1Q96L73 2696 aaPredicted RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 ANK3Q12955 4377 aaKnown RBP2.18□□□□□ -2.06
PTCD3-211ENST00000476215 ROS1P08922 2347 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 ABCA2Q9BZC7 2435 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 OR2AT4A6NND4 320 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 E7EQL1 145 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 K7ERS5 55 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 RFXANKO14593 260 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 SYNGR2O43760 224 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 SMIM24O75264 130 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 PDYNP01213 254 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 IGHV3-53P01767 116 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 RBP1P09455 135 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 CPMP14384 443 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 GABRA1P14867 456 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 PHBP35232 272 aa2.18□□□□□ -2.06
PTCD3-211ENST00000476215 DEKP35659 375 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms