RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 A0A087WWC5 75 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 C15orf62A8K5M9 175 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 LYG1Q8N1E2 194 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 ZNF251Q9BRH9 671 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 ELOVL5Q9NYP7 299 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 VAX2Q9UIW0 290 aa13.7□□□□□ -0.22
TVP23B-202ENST00000476139 RAI1Q7Z5J4 1906 aaPredicted RBP13.69□□□□□ -0.22
TVP23B-202ENST00000476139 CD81P60033 236 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 CTAG1AP78358 180 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 FFAR4Q5NUL3 377 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 WDR25Q64LD2 544 aaPredicted RBP13.69□□□□□ -0.22
TVP23B-202ENST00000476139 OR4A16Q8NH70 328 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 DDB2Q92466 427 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 FAM210BQ96KR6 192 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 CIB3Q96Q77 187 aaPredicted RBP13.69□□□□□ -0.22
TVP23B-202ENST00000476139 TMEM147Q9BVK8 224 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 PARD6GQ9BYG4 376 aaPredicted RBP13.69□□□□□ -0.22
TVP23B-202ENST00000476139 SDF2L1Q9HCN8 221 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 DSCAML1Q8TD84 2053 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 IGF2RP11717 2491 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 IRF2P14316 349 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 COL8A2P25067 703 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 GCSAMLQ5JQS6 135 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 C1QL4Q86Z23 238 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 OR10G4Q8NGN3 311 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 OR10G9Q8NGN4 311 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 OR10G7Q8NGN6 311 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 PINX1Q96BK5 328 aaKnown RBP13.69□□□□□ -0.22
TVP23B-202ENST00000476139 WFIKKN1Q96NZ8 548 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 SMIM7Q9BQ49 75 aa13.69□□□□□ -0.22
TVP23B-202ENST00000476139 C17orf100A8MU93 164 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 K7ENP7 123 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 FRZBQ92765 325 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 TMEM140Q9NV12 185 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 JKAMPQ9P055 326 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 ZNF835Q9Y2P0 537 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 TACC2O95359 2948 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 RRHO14718 337 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 NDUFB7P17568 137 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 HOXA5P20719 270 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 RELBQ01201 579 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 NPCDR1Q9BY65 106 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 GPR61Q9BZJ8 451 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 AURKAIP1Q9NWT8 199 aaPredicted RBP13.68□□□□□ -0.22
TVP23B-202ENST00000476139 POLEQ07864 2286 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 TRAV20A0A0B4J274 112 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 FCN3O75636 299 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 GNB2P62879 340 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 ATP6V1FQ16864 119 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 CENPVQ7Z7K6 275 aaPredicted RBP13.68□□□□□ -0.22
TVP23B-202ENST00000476139 OR4F5Q8NH21 305 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 NEUROG1Q92886 237 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 OR4F4Q96R69 305 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 GGACTQ9BVM4 153 aa13.68□□□□□ -0.22
TVP23B-202ENST00000476139 IFNA10P01566 189 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 ZNF383Q8NA42 475 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 CCL17Q92583 94 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 SMCO3A2RU48 225 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 CLDN34H7C241 214 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 TRGC1P0CF51 173 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 MYOD1P15172 320 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 MRPS11P82912 194 aaKnown RBP13.67□□□□□ -0.22
TVP23B-202ENST00000476139 RHOVQ96L33 236 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 COL25A1Q9BXS0 654 aaPredicted RBP13.67□□□□□ -0.22
TVP23B-202ENST00000476139 SIRT7Q9NRC8 400 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 ARFGEF3Q5TH69 2177 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 NBASA2RRP1 2371 aa13.67□□□□□ -0.22
TVP23B-202ENST00000476139 SOD3P08294 240 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 RAB7AP51149 207 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 ERVK-16P61578 105 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 MEF2BQ02080 365 aaPredicted RBP13.66□□□□□ -0.22
TVP23B-202ENST00000476139 TEX36Q5VZQ5 186 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 ZNF439Q8NDP4 499 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 RAB24Q969Q5 203 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 HEYLQ9NQ87 328 aaPredicted RBP13.66□□□□□ -0.22
TVP23B-202ENST00000476139 DCHS2Q6V1P9 2916 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 RBFOX2O43251 390 aaKnown RBP eCLIP13.66□□□□□ -0.22
TVP23B-202ENST00000476139 SOX15O60248 233 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 SPCS3P61009 180 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 OR10D4PQ8NGN7 298 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 NCOR1P1Q9H4R4 102 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 TIMM9Q9Y5J7 89 aa13.66□□□□□ -0.22
TVP23B-202ENST00000476139 TET2Q6N021 2002 aaPredicted RBP13.66□□□□□ -0.22
TVP23B-202ENST00000476139 TNCP24821 2201 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 PAGE4O60829 102 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 TNFRSF1AP19438 455 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 VWC2Q2TAL6 325 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 AARDQ4LEZ3 155 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 PYY3Q5JQD4 70 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 Q8N7P7 452 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 TMEM170AQ8WVE7 144 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 ZCCHC14Q8WYQ9 949 aaKnown RBP13.65□□□□□ -0.22
TVP23B-202ENST00000476139 TCEAL7Q9BRU2 100 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 SAP30LQ9HAJ7 183 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 IDI2-AS1Q9NZ38 188 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 TRAV38-1A0A0B4J264 116 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 CXorf65A6NEN9 183 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 IFNA1P01562 189 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms