RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 DEFA4P12838 97 aa15.21■□□□□ 0.03
VPS36-203ENST00000475375 AREGP15514 252 aa15.21■□□□□ 0.03
VPS36-203ENST00000475375 GADD45AP24522 165 aa15.21■□□□□ 0.03
VPS36-203ENST00000475375 STPG3Q8N7X2 389 aa15.21■□□□□ 0.03
VPS36-203ENST00000475375 PHLDA1Q8WV24 401 aaPredicted RBP15.21■□□□□ 0.03
VPS36-203ENST00000475375 FANCD2OSQ96PS1 177 aa15.21■□□□□ 0.03
VPS36-203ENST00000475375 C8orf4Q9NR00 106 aa15.21■□□□□ 0.03
VPS36-203ENST00000475375 SLC2A9Q9NRM0 540 aa15.21■□□□□ 0.03
VPS36-203ENST00000475375 KBTBD11O94819 623 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 CLEC3BP05452 202 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 CRHBPP24387 322 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 RANBP1P43487 201 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 ARFRP1Q13795 201 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 HES5Q5TA89 166 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 LGALS9CQ6DKI2 356 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 UNQ9165/PRO28630Q6UXU0 137 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 TMEM91Q6ZNR0 172 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 ZNF645Q8N7E2 425 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 VSTM2AQ8TAG5 236 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 MARC2Q969Z3 335 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 OR2A7Q96R45 310 aa15.2■□□□□ 0.02
VPS36-203ENST00000475375 LSM2Q9Y333 95 aaKnown RBP15.2■□□□□ 0.02
VPS36-203ENST00000475375 IGHV3-35A0A0C4DH35 117 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 E7EUB6 86 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 REG1AP05451 166 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 HSMCR30P0CW71 290 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 HIST1H1BP16401 226 aaKnown RBP15.19■□□□□ 0.02
VPS36-203ENST00000475375 CD36P16671 472 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 ATF4P18848 351 aaPredicted RBP15.19■□□□□ 0.02
VPS36-203ENST00000475375 CALRP27797 417 aaKnown RBP15.19■□□□□ 0.02
VPS36-203ENST00000475375 PSMB6P28072 239 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 PSMD7P51665 324 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 RPS25P62851 125 aaKnown RBP15.19■□□□□ 0.02
VPS36-203ENST00000475375 OR10R2Q8NGX6 335 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 FBLIM1Q8WUP2 373 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 RNF183Q96D59 192 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 CENPOQ9BU64 300 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 UFC1Q9Y3C8 167 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 V9GY05 133 aa15.19■□□□□ 0.02
VPS36-203ENST00000475375 TRBV7-1A0A0A6YYK4 115 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 MFSD2BA6NFX1 497 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 RAB27BO00194 218 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 ZNF735P0CB33 412 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 HIST1H1DP16402 221 aaKnown RBP15.18■□□□□ 0.02
VPS36-203ENST00000475375 RPL35AP18077 110 aaKnown RBP15.18■□□□□ 0.02
VPS36-203ENST00000475375 MAS1LP35410 378 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 RPL30P62888 115 aaKnown RBP15.18■□□□□ 0.02
VPS36-203ENST00000475375 OR4S2Q8NH73 311 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 TCTEX1D2Q8WW35 142 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 SPAG8Q99932 426 aaPredicted RBP15.18■□□□□ 0.02
VPS36-203ENST00000475375 MRPL27Q9P0M9 148 aaKnown RBP15.18■□□□□ 0.02
VPS36-203ENST00000475375 RBMX2Q9Y388 322 aaKnown RBP15.18■□□□□ 0.02
VPS36-203ENST00000475375 HECTD4Q9Y4D8 3996 aa15.18■□□□□ 0.02
VPS36-203ENST00000475375 IGKV1D-8A0A087WSZ0 117 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 A0A1B0GW64 132 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 ERICH4A6NGS2 130 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 MFNGO00587 321 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 CRYGCP07315 174 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 GPR183P32249 361 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 SSX9Q7RTT3 188 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 TMEM167AQ8TBQ9 72 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 CXorf58Q96LI9 332 aa15.17■□□□□ 0.02
VPS36-203ENST00000475375 KIR2DL5BA0A0G2JN68 375 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 KIR2DL5BA0A0G2JPC4 375 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 C8orf88P0DMB2 117 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 CTRB1P17538 263 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 GALP22466 123 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 NFYAP23511 347 aaPredicted RBP15.16■□□□□ 0.02
VPS36-203ENST00000475375 TRAM1Q15629 374 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 CTRB2Q6GPI1 263 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 PUSL1Q8N0Z8 303 aaKnown RBP15.16■□□□□ 0.02
VPS36-203ENST00000475375 KIR2DL5AQ8N109 375 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 KIR2DL5BQ8NHK3 375 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 SPATA2Q9UM82 520 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 OR2W1Q9Y3N9 320 aa15.16■□□□□ 0.02
VPS36-203ENST00000475375 MYOD1P15172 320 aa15.15■□□□□ 0.02
VPS36-203ENST00000475375 RPL8P62917 257 aaKnown RBP15.15■□□□□ 0.02
VPS36-203ENST00000475375 PLET1Q6UQ28 207 aa15.15■□□□□ 0.02
VPS36-203ENST00000475375 C5orf66Q9H5L9 145 aa15.15■□□□□ 0.02
VPS36-203ENST00000475375 SCN3BQ9NY72 215 aa15.15■□□□□ 0.02
VPS36-203ENST00000475375 IGLV11-55A0A075B6I3 123 aa15.14■□□□□ 0.01
VPS36-203ENST00000475375 SLC22A5O76082 557 aa15.14■□□□□ 0.01
VPS36-203ENST00000475375 PSMA1P25786 263 aaKnown RBP15.14■□□□□ 0.01
VPS36-203ENST00000475375 ELLP55199 621 aaPredicted RBP15.14■□□□□ 0.01
VPS36-203ENST00000475375 LAMTOR1Q6IAA8 161 aa15.14■□□□□ 0.01
VPS36-203ENST00000475375 Q6ZS49 121 aa15.14■□□□□ 0.01
VPS36-203ENST00000475375 HSD17B10Q99714 261 aaKnown RBP15.14■□□□□ 0.01
VPS36-203ENST00000475375 METTL21EPA6NDL7 271 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 TSPAN4O14817 238 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 HRASP01112 189 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 HLA-DQB1P01920 261 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 HLA-GP17693 338 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 FABP5Q01469 135 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 ODF3L2Q3SX64 289 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 OR5B3Q8NH48 314 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 GATAD1Q8WUU5 269 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 TAS2R8Q9NYW2 309 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 FBXL17Q9UF56 701 aa15.13■□□□□ 0.01
VPS36-203ENST00000475375 ELF5Q9UKW6 265 aaPredicted RBP15.13■□□□□ 0.01
VPS36-203ENST00000475375 IGKV1D-13A0A0B4J2D9 117 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms