RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 C18orf65Q6ZTR6 163 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 SGPP2Q8IWX5 399 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 Q8N9W7 124 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 OR4X2Q8NGF9 303 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 VSTM2AQ8TAG5 236 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 CLCC1Q96S66 551 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 FBXL15Q9H469 300 aa9.32□□□□□ -0.92
CLIP2-204ENST00000474962 C3orf85A0A1B0GTC6 90 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 CREBL2O60519 120 aaPredicted RBP9.31□□□□□ -0.92
CLIP2-204ENST00000474962 B3GALNT1O75752 331 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 ACTL6BO94805 426 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 ATG12O94817 140 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 NDUFA3O95167 84 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 CNIH1O95406 144 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 PF4P02776 101 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 ANXA3P12429 323 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 NQO2P16083 231 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 CCR6P51684 374 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 SSX9Q7RTT3 188 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 SLC35E3Q7Z769 313 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 TMED4Q7Z7H5 227 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 FOXRED2Q8IWF2 684 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 FAM71E2Q8N5Q1 922 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 DMBX1Q8NFW5 382 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 ABHD5Q8WTS1 349 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 PLEKHA2Q9HB19 425 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 PLSCR3Q9NRY6 295 aa9.31□□□□□ -0.92
CLIP2-204ENST00000474962 FAM240BA0A1B0GVZ2 78 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 RAMP3O60896 148 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 RPA2P15927 270 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 TAS2R31P59538 309 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 UBE2KP61086 200 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 TRIM16LQ309B1 348 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 PPP1R27Q86WC6 154 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 CENPSQ8N2Z9 138 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 TEX45Q8NA69 505 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 RHOVQ96L33 236 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 RTBDNQ9BSG5 229 aaPredicted RBP9.3□□□□□ -0.92
CLIP2-204ENST00000474962 C5orf66Q9H5L9 145 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 FAM212BQ9NTI7 297 aaPredicted RBP9.3□□□□□ -0.92
CLIP2-204ENST00000474962 COMMD9Q9P000 198 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 VSIG4Q9Y279 399 aa9.3□□□□□ -0.92
CLIP2-204ENST00000474962 NBEAL2Q6ZNJ1 2754 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 SRRM4A7MD48 611 aaKnown RBP9.29□□□□□ -0.92
CLIP2-204ENST00000474962 H0Y980 276 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 K7EIL1 84 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 AP4M1O00189 453 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 PLA2G10O15496 165 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 OR2A4O95047 310 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 S1PR2O95136 353 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 NDUFB6O95139 128 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 KRASP01116 189 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 IGLV2-23P01705 113 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 IGHG2P01859 326 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 HLA-DRB1P01911 266 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 GNB1P62873 340 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 DHODHQ02127 395 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 TMEM128Q5BJH2 165 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 ETV3LQ6ZN32 361 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 MRPL41Q8IXM3 137 aaKnown RBP9.29□□□□□ -0.92
CLIP2-204ENST00000474962 LINC00482Q8N8I6 264 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 RNASE11Q8TAA1 199 aaKnown RBP9.29□□□□□ -0.92
CLIP2-204ENST00000474962 ENKURQ8TC29 256 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 CHPT1Q8WUD6 406 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 MRGPRFQ96AM1 343 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 RCC1LQ96I51 464 aaKnown RBP9.29□□□□□ -0.92
CLIP2-204ENST00000474962 OR2A7Q96R45 310 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 GON7Q9BXV9 100 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 NAA60Q9H7X0 242 aa9.29□□□□□ -0.92
CLIP2-204ENST00000474962 PIGBOS1A0A0B4J2F0 54 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 CRYM-AS1A6NIL9 109 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 MARCH11A6NNE9 402 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 SNAPC5O75971 98 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 OR5AC1P0C628 307 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 SAA1P0DJI8 122 aaPredicted RBP9.28□□□□□ -0.92
CLIP2-204ENST00000474962 VAMP1P23763 118 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 HOXD3P31249 432 aaPredicted RBP9.28□□□□□ -0.92
CLIP2-204ENST00000474962 RAB25P57735 213 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 BRWD1-AS2P59051 145 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 RPL23AP62750 156 aaKnown RBP9.28□□□□□ -0.92
CLIP2-204ENST00000474962 SLC35B1P78383 322 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 TMEM267Q0VDI3 215 aaPredicted RBP9.28□□□□□ -0.92
CLIP2-204ENST00000474962 ASAH1Q13510 395 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 TNXAQ16473 311 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 SP6Q3SY56 376 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 DEFB121Q5J5C9 76 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 ZNF562Q6V9R5 426 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 LCNL1Q6ZST4 164 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 C8orf86Q6ZUL3 223 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 H2BFWTQ7Z2G1 175 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 ZNF695Q8IW36 515 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 MMD2Q8IY49 270 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 VKORC1L1Q8N0U8 176 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 STPG2Q8N412 459 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 ADAD2Q8NCV1 583 aaKnown RBP9.28□□□□□ -0.92
CLIP2-204ENST00000474962 DUX3Q96PT4 197 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 OR51J1Q9H342 316 aa9.28□□□□□ -0.92
CLIP2-204ENST00000474962 PARP11Q9NR21 331 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms