RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	TRAPPC2L	H3BP13	241 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	MPDU1	O75352	247 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ZNF737	O75373	536 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	CST7	O76096	145 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR7C1	O76099	320 aa	Predicted RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	NXPH3	O95157	252 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	HRAS	P01112	189 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OPN1LW	P04000	364 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	SERPINA7	P05543	415 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	RNF224	P0DH78	156 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	CCL3	P10147	92 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	BTF3	P20290	206 aa	Known RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	GZMH	P20718	246 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ARR3	P36575	388 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	TSPAN7	P41732	249 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	PSMB3	P49720	205 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ASCL1	P50553	236 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	YPEL3	P61236	119 aa	Predicted RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	RPL15	P61313	204 aa	Known RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	SELENOT	P62341	195 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	RAB11A	P62491	216 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	RUNX1	Q01196	453 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	MEF2B	Q02080	365 aa	Predicted RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ODF1	Q14990	250 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ZNF146	Q15072	292 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	CEACAM16	Q2WEN9	425 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	BSX	Q3C1V8	233 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	AKIRIN2	Q53H80	203 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	C9orf152	Q5JTZ5	239 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	C1orf194	Q5T5A4	169 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	PLCXD3	Q63HM9	321 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	MEX3B	Q6ZN04	569 aa	Known RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ZNF497	Q6ZNH5	498 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	SSX9	Q7RTT3	188 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	SSX7	Q7RTT5	188 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ZNF573	Q86YE8	665 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438		Q8IYB0	196 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ZNF664	Q8N3J9	261 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	RPP25L	Q8N5L8	163 aa	Known RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438		Q8N7P7	452 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR10V1	Q8NGI7	309 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR2Y1	Q8NGV0	311 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR2T10	Q8NGZ9	312 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR10J5	Q8NHC4	309 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	RNASE11	Q8TAA1	199 aa	Known RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	SAP25	Q8TEE9	199 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	PIGC	Q92535	297 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	GMPPA	Q96IJ6	420 aa	Predicted RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	POM121L2	Q96KW2	1035 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	HIST1H2AA	Q96QV6	131 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR4C12	Q96R67	309 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR51B6	Q9H340	312 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	OR51I2	Q9H344	312 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ZNF665	Q9H7R5	613 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	PSENEN	Q9NZ42	101 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	GNG13	Q9P2W3	67 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ERRFI1	Q9UJM3	462 aa	Predicted RBP	3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	LY96	Q9Y6Y9	160 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	ACAN	P16112	2415 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	FREM1	Q5H8C1	2179 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	KNL1	Q8NG31	2342 aa		3.01	□□□□□ -1.93
CSMD2-208	ENST00000471438	TET2	Q6N021	2002 aa	Predicted RBP	3	□□□□□ -1.93
CSMD2-208	ENST00000471438	IGHV3-15	A0A0B4J1V0	119 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	KIR2DL5B	A0A0G2JN68	375 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	KIR2DL5B	A0A0G2JPC4	375 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	MAP1LC3B2	A6NCE7	125 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	TMEM210	A6NLX4	147 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	LRRC30	A6NM36	301 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	CD300LB	A8K4G0	201 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	ZNF785	A8K8V0	405 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	VWC2L	B2RUY7	222 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438		M0QZK8	103 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	RAB29	O14966	203 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	PDE6D	O43924	150 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	YPEL1	O60688	119 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	MMP23A	O75900	390 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	NXPH2	O95156	264 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	IGKV1D-33	P01593	117 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	IGKV1-33	P01594	117 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	REG1A	P05451	166 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	SERPINE2	P07093	398 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	METTL15P1	P0C7V9	234 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	PSG2	P11465	335 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	SELL	P14151	372 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	FABP4	P15090	132 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	B4GALT1	P15291	398 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	RAB4A	P20338	218 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	MAL	P21145	153 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	TUBG1	P23258	451 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	OMG	P23515	440 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	NPPC	P23582	126 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	CD1B	P29016	333 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	EPHA8	P29322	1005 aa	Predicted RBP	3	□□□□□ -1.93
CSMD2-208	ENST00000471438	FOXL2	P58012	376 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	ERVFC1-1	P60608	527 aa		3	□□□□□ -1.93
CSMD2-208	ENST00000471438	UBE2N	P61088	152 aa	Known RBP	3	□□□□□ -1.93
CSMD2-208	ENST00000471438	NUTF2	P61970	127 aa	Known RBP	3	□□□□□ -1.93
CSMD2-208	ENST00000471438	RPS18	P62269	152 aa	Known RBP	3	□□□□□ -1.93
CSMD2-208	ENST00000471438	GNG3	P63215	75 aa		3	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms