RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 FCN1O00602 326 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 ATP6V0E1O15342 81 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 SERPINE2P07093 398 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 IL6RP08887 468 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 ERVK-16P61578 105 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 ASAH1Q13510 395 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 MMD2Q8IY49 270 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 ARPC1AQ92747 370 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 R3HDM4Q96D70 268 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 CITED1Q99966 193 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 TBC1D24Q9ULP9 559 aa11.76□□□□□ -0.53
CDC42SE1-203ENST00000470278 LINC00854A0A1B0GVQ3 168 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 SLC6A1P30531 599 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 MAS1LP35410 378 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 LPAR6P43657 344 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 CCR6P51684 374 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 CFHR3Q02985 330 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 PJVKQ0ZLH3 352 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 C19orf54Q5BKX5 351 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 SGPP2Q8IWX5 399 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 ADAD2Q8NCV1 583 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 NOL4LQ96MY1 436 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM222Q9H0R3 208 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 PARP11Q9NR21 331 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
CDC42SE1-203ENST00000470278 PLXNB1O43157 2135 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 TNCP24821 2201 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 TEX13DA0A0J9YY54 714 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 PSMB11A5LHX3 300 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 ARPC1BO15143 372 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 OR5AC1P0C628 307 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 VDAC1P21796 283 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 KRTAP10-3P60369 221 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 UBE2MP61081 183 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 RPL8P62917 257 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 SUPT4H1P63272 117 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 SLC35B1P78383 322 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 DHODHQ02127 395 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM128Q5BJH2 165 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 SHISA2Q6UWI4 295 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 SSX9Q7RTT3 188 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 CENPSQ8N2Z9 138 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 COMMD1Q8N668 190 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 DMBX1Q8NFW5 382 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 SEC22AQ96IW7 307 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 CLCC1Q96S66 551 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 FBXO7Q9Y3I1 522 aa11.74□□□□□ -0.53
CDC42SE1-203ENST00000470278 ATG12O94817 140 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 CDS2O95674 445 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 KRASP01116 189 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 AKR1C4P17516 323 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 PPIFP30405 207 aaKnown RBP11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 IFITM3Q01628 133 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 FXYD3Q14802 87 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 AKIRIN2Q53H80 203 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMED4Q7Z7H5 227 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 CENPVQ7Z7K6 275 aaPredicted RBP11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 SLC25A42Q86VD7 318 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 KCNIP3Q9Y2W7 256 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
CDC42SE1-203ENST00000470278 TRAV41A0A0B4J266 112 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 UPK2O00526 184 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 ACTL6BO94805 426 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 CNIH1O95406 144 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 IGHG4P01861 327 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 ANXA3P12429 323 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 HLA-GP17693 338 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 G6PCP35575 357 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 GNB1P62873 340 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 SRPXP78539 464 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM267Q0VDI3 215 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 TNXAQ16473 311 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 SP6Q3SY56 376 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 MZT2BQ6NZ67 158 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 MINDY2Q8NBR6 621 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 OR5AU1Q8NGC0 362 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 OR4X2Q8NGF9 303 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 SRSF12Q8WXF0 261 aaKnown RBP11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM68Q96MH6 324 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 TSC22D3Q99576 134 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 C20orf85Q9H1P6 137 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 LINC00527Q9UJ94 153 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 NUBP2Q9Y5Y2 271 aa11.72□□□□□ -0.53
CDC42SE1-203ENST00000470278 PIGBOS1A0A0B4J2F0 54 aa11.71□□□□□ -0.53
CDC42SE1-203ENST00000470278 FBXO24O75426 580 aa11.71□□□□□ -0.53
CDC42SE1-203ENST00000470278 IGKV1-5P01602 117 aa11.71□□□□□ -0.53
CDC42SE1-203ENST00000470278 P0C879 139 aa11.71□□□□□ -0.53
CDC42SE1-203ENST00000470278 TMEM187Q14656 261 aa11.71□□□□□ -0.53
CDC42SE1-203ENST00000470278 TEX38Q6PEX7 206 aa11.71□□□□□ -0.53
CDC42SE1-203ENST00000470278 GRPEL2Q8TAA5 225 aa11.71□□□□□ -0.53
CDC42SE1-203ENST00000470278 LHFPL5Q8TAF8 219 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms