RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-226ENST00000468086 HLA-DRB3P79483 266 aa0.23□□□□□ -2.37
RBM39-226ENST00000468086 Q3ZCU0 254 aa0.23□□□□□ -2.37
RBM39-226ENST00000468086 COPS6Q7L5N1 327 aa0.23□□□□□ -2.37
RBM39-226ENST00000468086 ACOT12Q8WYK0 555 aa0.23□□□□□ -2.37
RBM39-226ENST00000468086 PCDH15Q96QU1 1955 aa0.23□□□□□ -2.37
RBM39-226ENST00000468086 APOMO95445 188 aa0.22□□□□□ -2.37
RBM39-226ENST00000468086 CD40LGP29965 261 aa0.22□□□□□ -2.37
RBM39-226ENST00000468086 HAAOP46952 286 aa0.22□□□□□ -2.37
RBM39-226ENST00000468086 SPATA8Q6RVD6 105 aa0.22□□□□□ -2.37
RBM39-226ENST00000468086 C1orf109Q9NX04 203 aa0.22□□□□□ -2.37
RBM39-226ENST00000468086 CHD5Q8TDI0 1954 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 LOC110117498A0A087WWA1 95 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 TRBV6-7A0A0A0MS04 114 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 TMED7-TICAM2A0A0A6YYA0 188 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 TRAV14DV4A0A0A6YYC5 116 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 TMEM269A0A1B0GVZ9 245 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 IRGMA1A4Y4 181 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 CCRL2O00421 344 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 KRT75O95678 551 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 UBBP0CG47 229 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 HIST1H1CP16403 213 aaKnown RBP0.21□□□□□ -2.38
RBM39-226ENST00000468086 CXCL2P19875 107 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 SYT1P21579 422 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 KDELR2P33947 212 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 SLAMF1Q13291 335 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 C4orf26Q17RF5 130 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 AQP3Q92482 292 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 SIKE1Q9BRV8 207 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 HES4Q9HCC6 221 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 TIMM22Q9Y584 194 aa0.21□□□□□ -2.38
RBM39-226ENST00000468086 KIF24Q5T7B8 1368 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 COX7A2LO14548 114 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 AZIN1O14977 448 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 BRI3O95415 125 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 SHBGP04278 402 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 S100A9P06702 114 aaKnown RBP0.2□□□□□ -2.38
RBM39-226ENST00000468086 METTL15P1P0C7V9 234 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 CXCL3P19876 107 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 NFYAP23511 347 aaPredicted RBP0.2□□□□□ -2.38
RBM39-226ENST00000468086 FXYD2P54710 66 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 ZNHIT3Q15649 155 aaPredicted RBP0.2□□□□□ -2.38
RBM39-226ENST00000468086 HLA-DRB5Q30154 266 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 DNAL1Q4LDG9 190 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 SBSPONQ8IVN8 264 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 C1orf158Q8N1D5 194 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 OR5L1Q8NGL2 311 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 ASB13Q8WXK3 278 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 GNPNAT1Q96EK6 184 aaPredicted RBP0.2□□□□□ -2.38
RBM39-226ENST00000468086 ANKRD36BP1Q96IX9 119 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 MED10Q9BTT4 135 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 NSRP1Q9H0G5 558 aaKnown RBP0.2□□□□□ -2.38
RBM39-226ENST00000468086 PRELID1Q9Y255 219 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 TP53TG1Q9Y2A0 90 aa0.2□□□□□ -2.38
RBM39-226ENST00000468086 ARFGEF3Q5TH69 2177 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 TMEM212A6NML5 194 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 C19orf84I3L1E1 186 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 PMP2P02689 132 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 GRPRP30550 384 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 RPL30P62888 115 aaKnown RBP0.19□□□□□ -2.38
RBM39-226ENST00000468086 RUNX1Q01196 453 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 ZNF345Q14585 488 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 SLC37A2Q8TED4 501 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 OBSCN-AS1Q96MR7 158 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 TIPINQ9BVW5 301 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 LAMA4Q16363 1823 aa0.19□□□□□ -2.38
RBM39-226ENST00000468086 FUOMA2VDF0 154 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 SLC22A1O15245 554 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 COCHO43405 550 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 NSA2O95478 260 aaKnown RBP0.18□□□□□ -2.38
RBM39-226ENST00000468086 IL6P05231 212 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 DDTP30046 118 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 ZNF676Q8N7Q3 588 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 RSL24D1Q9UHA3 163 aaKnown RBP0.18□□□□□ -2.38
RBM39-226ENST00000468086 CFAP45Q9UL16 551 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 BAIAP2Q9UQB8 552 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 HEATR5BQ9P2D3 2071 aa0.18□□□□□ -2.38
RBM39-226ENST00000468086 PTPRSQ13332 1948 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 MACF1Q9UPN3 7388 aaKnown RBP0.17□□□□□ -2.38
RBM39-226ENST00000468086 C21orf140B9A014 251 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 MKRN2OSH3BPM6 223 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 LEPROTO15243 131 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 SULT1A3P0DMM9 295 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 SULT1A4P0DMN0 295 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 SSX8Q7RTT4 187 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 CRLF3Q8IUI8 442 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 OR7G1Q8NGA0 311 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 SLC22A4Q9H015 551 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 HRASLSQ9HDD0 168 aa0.17□□□□□ -2.38
RBM39-226ENST00000468086 ORM1P02763 201 aa0.16□□□□□ -2.38
RBM39-226ENST00000468086 POLR2GP62487 172 aaKnown RBP eCLIP0.16□□□□□ -2.38
RBM39-226ENST00000468086 JOSD1Q15040 202 aaPredicted RBP0.16□□□□□ -2.38
RBM39-226ENST00000468086 SAPCD1Q5SSQ6 148 aa0.16□□□□□ -2.38
RBM39-226ENST00000468086 TBC1D19Q8N5T2 526 aa0.16□□□□□ -2.38
RBM39-226ENST00000468086 SPERTQ8NA61 448 aa0.16□□□□□ -2.38
RBM39-226ENST00000468086 HAVCR2Q8TDQ0 301 aa0.16□□□□□ -2.38
RBM39-226ENST00000468086 AGPAT3Q9NRZ7 376 aa0.16□□□□□ -2.38
RBM39-226ENST00000468086 EURLQ9NYK6 297 aa0.16□□□□□ -2.38
RBM39-226ENST00000468086 STRCQ7RTU9 1775 aa0.15□□□□□ -2.39
RBM39-226ENST00000468086 ZNF879B4DU55 563 aa0.15□□□□□ -2.39
RBM39-226ENST00000468086 FTCDNL1E5RQL4 147 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms