RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 TPTE2P1Q5T6R2 138 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
DDX56-208ENST00000467318 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
DDX56-208ENST00000467318 DUXBA0A1W2PPF3 345 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 KCNAB3O43448 404 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 P2RY1P47900 373 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 RND3P61587 244 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 ZNF816Q0VGE8 651 aaPredicted RBP11.92□□□□□ -0.5
DDX56-208ENST00000467318 FAM122CQ6P4D5 195 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 ZNF833PQ6ZTB9 187 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 LDLRAD3Q86YD5 345 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 COMMD1Q8N668 190 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 UBAC2Q8NBM4 344 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 ZBTB34Q8NCN2 500 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 AJUBAQ96IF1 538 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 AKR1E2Q96JD6 320 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 SPIN2AQ99865 258 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 SPIN2BQ9BPZ2 258 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 ZNF251Q9BRH9 671 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 PARP11Q9NR21 331 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 SLC2A9Q9NRM0 540 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 CARHSP1Q9Y2V2 147 aaKnown RBP11.92□□□□□ -0.5
DDX56-208ENST00000467318 LSM5Q9Y4Y9 91 aaKnown RBP11.92□□□□□ -0.5
DDX56-208ENST00000467318 HILPDAQ9Y5L2 63 aa11.92□□□□□ -0.5
DDX56-208ENST00000467318 A0A0U1RQK1 487 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 HSD17B6O14756 317 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 OR5AC1P0C628 307 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 TMEM268Q5VZI3 342 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 RPL7L1Q6DKI1 246 aaKnown RBP11.91□□□□□ -0.5
DDX56-208ENST00000467318 TGIF2LXQ8IUE1 241 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 SEC11CQ9BY50 192 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 FAM212BQ9NTI7 297 aaPredicted RBP11.91□□□□□ -0.5
DDX56-208ENST00000467318 SOX21Q9Y651 276 aaPredicted RBP11.91□□□□□ -0.5
DDX56-208ENST00000467318 F8W036 122 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 DNASE2O00115 360 aaPredicted RBP11.91□□□□□ -0.5
DDX56-208ENST00000467318 ST8SIA3O43173 380 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 SNAPINO95295 136 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 CDS2O95674 445 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 S100GP29377 79 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 GNRHRP30968 328 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 CAV2P51636 162 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 BCL6BQ8N143 479 aaPredicted RBP11.91□□□□□ -0.5
DDX56-208ENST00000467318 DRAM1Q8N682 238 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 C22orf15Q8WYQ4 148 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 ARV1Q9H2C2 271 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 TREM1Q9NP99 234 aa11.91□□□□□ -0.5
DDX56-208ENST00000467318 FN1P02751 2386 aaKnown RBP11.9□□□□□ -0.5
DDX56-208ENST00000467318 ZFHX3Q15911 3703 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 MPPED1O15442 326 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 PROP1O75360 226 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 CRLF1O75462 422 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 IGLV2-14P01704 120 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.5
DDX56-208ENST00000467318 SEC11BP0C7V7 166 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 PVALBP20472 110 aaPredicted RBP11.9□□□□□ -0.5
DDX56-208ENST00000467318 RAB5CP51148 216 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 F2RL1P55085 397 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 DIAPH2-AS1Q14236 149 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 PRDM13Q9H4Q3 707 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 CCL28Q9NRJ3 127 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 FBXL17Q9UF56 701 aa11.9□□□□□ -0.5
DDX56-208ENST00000467318 IGHV1-3A0A0C4DH29 117 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 C3orf85A0A1B0GTC6 90 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 GPR31O00270 319 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 MED6O75586 246 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 BRS3P32247 399 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 DYNLT3P51808 116 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 DEFB112Q30KQ8 113 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 PHLDA2Q53GA4 152 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 CLRN3Q8NCR9 226 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 HSD17B10Q99714 261 aaKnown RBP11.89□□□□□ -0.51
DDX56-208ENST00000467318 AIFM2Q9BRQ8 373 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 UQCC1Q9NVA1 299 aa11.89□□□□□ -0.51
DDX56-208ENST00000467318 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
DDX56-208ENST00000467318 A0A1W2PPI3 338 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 M0R1X1 148 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 REG1BP48304 166 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 HABP2Q14520 560 aaPredicted RBP11.88□□□□□ -0.51
DDX56-208ENST00000467318 ATRAIDQ6UW56 229 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 BTNL8Q6UX41 500 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 ZNF66Q6ZN08 573 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 LYZL2Q7Z4W2 148 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 TMEM56Q96MV1 263 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 TMEM222Q9H0R3 208 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 STRAPQ9Y3F4 350 aaKnown RBP11.88□□□□□ -0.51
DDX56-208ENST00000467318 TMEM56-RWDD3S4R434 201 aa11.88□□□□□ -0.51
DDX56-208ENST00000467318 CT45A6P0DMU7 189 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 CT45A5P0DMU8 189 aa11.87□□□□□ -0.51
DDX56-208ENST00000467318 CT45A7P0DMV0 189 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms