RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 OR4A5Q8NH83 315 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 ARPC1AQ92747 370 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 ZNF430Q9H8G1 570 aaPredicted RBP11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 BET1LQ9NYM9 111 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 ZNF580Q9UK33 172 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 WSB1Q9Y6I7 421 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 TRAV41A0A0B4J266 112 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 CRYM-AS1A6NIL9 109 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 G3V318 75 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 FBXO24O75426 580 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 B3GALNT1O75752 331 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 ACTL6BO94805 426 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 KRASP01116 189 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 CD28P10747 220 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 RPA2P15927 270 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 G6PCP35575 357 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 CCR6P51684 374 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 RBMS2Q15434 407 aaKnown RBP11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 TNXAQ16473 311 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 SP6Q3SY56 376 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 OR4X2Q8NGF9 303 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 GRPEL2Q8TAA5 225 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 TMEM230Q96A57 120 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 FAM103A1Q9BTL3 118 aaKnown RBP11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 NAA60Q9H7X0 242 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 TMEM140Q9NV12 185 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 NUBP2Q9Y5Y2 271 aa11.36□□□□□ -0.59
DNMT3A-208ENST00000466601 MARCH11A6NNE9 402 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 UPK2O00526 184 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 LYRM1O43325 122 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 IGKV1-39P01597 117 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 IGKV1D-39P04432 117 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 IL6RP08887 468 aaPredicted RBP11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 OR5AC1P0C628 307 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 AKR1C4P17516 323 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 UCP1P25874 307 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 BTCP35070 178 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 CFHR3Q02985 330 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 TMEM267Q0VDI3 215 aaPredicted RBP11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 ECSCRQ19T08 205 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 HIST2H2BDQ6DRA6 164 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 TMED4Q7Z7H5 227 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 SGPP2Q8IWX5 399 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 COMMD1Q8N668 190 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 PLXNB1O43157 2135 aa11.35□□□□□ -0.59
DNMT3A-208ENST00000466601 UPK1BO75841 260 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 NDUFB6O95139 128 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 PPIFP30405 207 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 MAS1LP35410 378 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 RPL8P62917 257 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 DHODHQ02127 395 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 TRIM16LQ309B1 348 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 TCTEX1D4Q5JR98 221 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 TEX38Q6PEX7 206 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 CADM3Q8N126 398 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 LFNGQ8NES3 379 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 SRSF12Q8WXF0 261 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 SEC22AQ96IW7 307 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 CITED2Q99967 270 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 KCNIP3Q9Y2W7 256 aa11.34□□□□□ -0.59
DNMT3A-208ENST00000466601 TRAV3A0A0B4J244 114 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 MSGN1A6NI15 193 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 ATG12O94817 140 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 IGHG4P01861 327 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 HLA-GP17693 338 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 CD83Q01151 205 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 C10orf55Q5SWW7 151 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 MINDY2Q8NBR6 621 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 GLYATL2Q8WU03 294 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 GALNT14Q96FL9 552 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 PHB2Q99623 299 aa11.33□□□□□ -0.6
DNMT3A-208ENST00000466601 A0A1W2PN81 502 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 TCRBV4S1A1TA0A5B7 111 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 SNAPC5O75971 98 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 CDS2O95674 445 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 OPN1MWP04001 364 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 ELANEP08246 267 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 FGF2P09038 288 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 OR9G9P0C7N8 305 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 OPN1MW2P0DN77 364 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 OPN1MW3P0DN78 364 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 MYOD1P15172 320 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 CHRNA7P36544 502 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 SUPT4H1P63272 117 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 FOXE3Q13461 319 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM128Q5BJH2 165 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 TMEM68Q96MH6 324 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 TSC22D3Q99576 134 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 SPIN2AQ99865 258 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 SPIN2BQ9BPZ2 258 aa11.32□□□□□ -0.6
DNMT3A-208ENST00000466601 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms