RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 RPL39P5Q59GN2 51 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 Q5PR19 223 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 CCDC144NLQ6NUI1 221 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 LYZL2Q7Z4W2 148 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 VMO1Q7Z5L0 202 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 NOXA1Q86UR1 476 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 TGIF2LXQ8IUE1 241 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 PNKDQ8N490 385 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 TEX29Q8N6K0 151 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 SLC35G3Q8N808 338 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 UXS1Q8NBZ7 420 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 OR4D5Q8NGN0 318 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 OR4C13Q8NGP0 309 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 OR10X1Q8NGY0 326 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 OR52E5Q8NH55 327 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 OR51H1Q8NH63 302 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 OR4S2Q8NH73 311 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 OR4A5Q8NH83 315 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 TCTEX1D2Q8WW35 142 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 LEAP2Q969E1 77 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 LHX4Q969G2 390 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 GPR146Q96CH1 333 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 FYTTD1Q96QD9 318 aaKnown RBP4.41□□□□□ -1.7
VPS41-211ENST00000466017 KLK15Q9H2R5 256 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 NARFLQ9H6Q4 476 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 RANGRFQ9HD47 186 aaPredicted RBP4.41□□□□□ -1.7
VPS41-211ENST00000466017 SLC35D1Q9NTN3 355 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 ONECUT1Q9UBC0 465 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 AUP1Q9Y679 476 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 MYO18BQ8IUG5 2567 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 SPG11Q96JI7 2443 aa4.41□□□□□ -1.7
VPS41-211ENST00000466017 USP9YO00507 2555 aaPredicted RBP4.4□□□□□ -1.7
VPS41-211ENST00000466017 MED13LQ71F56 2210 aa4.4□□□□□ -1.7
VPS41-211ENST00000466017 IGHV1-3A0A0C4DH29 117 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 CENPVL3A0A0U1RRI6 287 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 A0A1W2PPE3 182 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 MEX3AA1L020 520 aaKnown RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 C5orf51A6NDU8 294 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 INS-IGF2F8WCM5 200 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 G3V3Q6 166 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 ST8SIA3O43173 380 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 TNFSF12O43508 249 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 FCGR3BO75015 233 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 ADAP1O75689 374 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 MPC2O95563 127 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 IGKV1-5P01602 117 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 APOA2P02652 100 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 RLN2P04090 185 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 ARG1P05089 322 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 HOXB5P09067 269 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 IGHV4-31P0DP07 118 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 GNG10P50151 68 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 TAS2R30P59541 319 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 SMCO1Q147U7 214 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 RTL8BQ17RB0 113 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 IAH1Q2TAA2 248 aaPredicted RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 TMEM249Q2WGJ8 235 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 TPTE2P1Q5T6R2 138 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 DCAF12L2Q5VW00 463 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 CYB5R2Q6BCY4 276 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 HIST2H2BCQ6DN03 193 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 C11orf87Q6NUJ2 197 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 ZNF429Q86V71 674 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 PRIMA1Q86XR5 153 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 FOXRED2Q8IWF2 684 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 PUSL1Q8N0Z8 303 aaKnown RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 TEX45Q8NA69 505 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 ZBTB8BQ8NAP8 495 aaPredicted RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 VSTM2AQ8TAG5 236 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 RPEQ96AT9 228 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 FLYWCH2Q96CP2 140 aaKnown RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 RRNAD1Q96FB5 475 aaKnown RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 OR10C1Q96KK4 312 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 RNF126Q9BV68 326 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 BET1LQ9NYM9 111 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 WASHC3Q9Y3C0 194 aa4.4□□□□□ -1.71
VPS41-211ENST00000466017 PRRC2AP48634 2157 aaKnown RBP4.4□□□□□ -1.71
VPS41-211ENST00000466017 IGHV1-69DA0A0B4J2H0 117 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 C13orf42A0A1B0GVH6 325 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 A0A1W2PPI3 338 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 MPTX1A8MV57 137 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 RAMP3O60896 148 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 MED6O75586 246 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 S1PR2O95136 353 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 SIX6O95475 246 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 IGHV1-69P01742 117 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 IGHV3-7P01780 117 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 CRYGBP07316 175 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 PET100P0DJ07 73 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 MAS1LP35410 378 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 ATP5IP56385 69 aaPredicted RBP4.39□□□□□ -1.71
VPS41-211ENST00000466017 UBE2KP61086 200 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 ERVK-16P61578 105 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 LDLRAD2Q5SZI1 272 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 THOC7Q6I9Y2 204 aaKnown RBP4.39□□□□□ -1.71
VPS41-211ENST00000466017 PRSS54Q6PEW0 395 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 C9orf139Q6ZV77 190 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 H2BFWTQ7Z2G1 175 aa4.39□□□□□ -1.71
VPS41-211ENST00000466017 NPBQ8NG41 125 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms