RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 MAFIPQ8WZ33 124 aa8.72□□□□□ -1.01
CNOT4-208ENST00000465721 RNF183Q96D59 192 aa8.72□□□□□ -1.01
CNOT4-208ENST00000465721 PLCXD1Q9NUJ7 323 aa8.72□□□□□ -1.01
CNOT4-208ENST00000465721 LSM2Q9Y333 95 aaKnown RBP8.72□□□□□ -1.01
CNOT4-208ENST00000465721 ZNF320A2RRD8 509 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 CRYGCP07315 174 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 AREGP15514 252 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 RCN1Q15293 331 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 RAB11BQ15907 218 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 ODF3L2Q3SX64 289 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 FAM106AQ4KMX7 169 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 VKORC1L1Q8N0U8 176 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 BATF3Q9NR55 127 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 SLC2A9Q9NRM0 540 aa8.71□□□□□ -1.02
CNOT4-208ENST00000465721 RBM7Q9Y580 266 aaKnown RBP8.71□□□□□ -1.02
CNOT4-208ENST00000465721 KIR2DL5BA0A0G2JN68 375 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 KIR2DL5BA0A0G2JPC4 375 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 MFSD2BA6NFX1 497 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 MFNGO00587 321 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 UBE2CO00762 179 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 DENRO43583 198 aaKnown RBP8.7□□□□□ -1.02
CNOT4-208ENST00000465721 FCGR3BO75015 233 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 KBTBD11O94819 623 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 S1PR2O95136 353 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 ZNF735P0CB33 412 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 RPL27AP46776 148 aaKnown RBP8.7□□□□□ -1.02
CNOT4-208ENST00000465721 RPL30P62888 115 aaKnown RBP8.7□□□□□ -1.02
CNOT4-208ENST00000465721 OR2B11Q5JQS5 317 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 TMEM91Q6ZNR0 172 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 KCTD9Q7L273 389 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 KIR2DL5AQ8N109 375 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 OR2C3Q8N628 320 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 TMEM217Q8N7C4 229 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 KIR2DL5BQ8NHK3 375 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 MARC2Q969Z3 335 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 EEF1AKMT3Q96AZ1 226 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 FAM3DQ96BQ1 224 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 FYTTD1Q96QD9 318 aaKnown RBP8.7□□□□□ -1.02
CNOT4-208ENST00000465721 SPAG8Q99932 426 aaPredicted RBP8.7□□□□□ -1.02
CNOT4-208ENST00000465721 GINS4Q9BRT9 223 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 MND1Q9BWT6 205 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 UBQLN2Q9UHD9 624 aa8.7□□□□□ -1.02
CNOT4-208ENST00000465721 AK6Q9Y3D8 172 aaKnown RBP8.7□□□□□ -1.02
CNOT4-208ENST00000465721 IGLV11-55A0A075B6I3 123 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 IGKV1D-8A0A087WSZ0 117 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 TMEM272A0A1B0GTI8 110 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 DPPA5A6NC42 116 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 CTRB1P17538 263 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 GALP22466 123 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 PSMB6P28072 239 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 MRPS15P82914 257 aaKnown RBP8.69□□□□□ -1.02
CNOT4-208ENST00000465721 TNP2Q05952 138 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 ARFRP1Q13795 201 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 SPHARQ15513 63 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 CTRB2Q6GPI1 263 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 RBPMS2Q6ZRY4 209 aaKnown RBP8.69□□□□□ -1.02
CNOT4-208ENST00000465721 Q6ZS49 121 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 C8orf59Q8N0T1 100 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-208ENST00000465721 PUSL1Q8N0Z8 303 aaKnown RBP8.69□□□□□ -1.02
CNOT4-208ENST00000465721 DHRSXQ8N5I4 330 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 ZNF645Q8N7E2 425 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 BPIFB6Q8NFQ5 453 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 TMEM167AQ8TBQ9 72 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 RAB3CQ96E17 227 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 OR51E2Q9H255 320 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 MRPL27Q9P0M9 148 aaKnown RBP8.69□□□□□ -1.02
CNOT4-208ENST00000465721 MRPS7Q9Y2R9 242 aaKnown RBP8.69□□□□□ -1.02
CNOT4-208ENST00000465721 AGRNO00468 2067 aa8.69□□□□□ -1.02
CNOT4-208ENST00000465721 CGB1A6NKQ9 187 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 TSPAN4O14817 238 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 IGLV2-14P01704 120 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 MYOD1P15172 320 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 HIST1H1DP16402 221 aaKnown RBP8.68□□□□□ -1.02
CNOT4-208ENST00000465721 GNB3P16520 340 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 FCGR2BP31994 310 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-208ENST00000465721 GPR183P32249 361 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 ELLP55199 621 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-208ENST00000465721 EIF4EBP1Q13541 118 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-208ENST00000465721 C2orf76Q3KRA6 126 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 ZNF585BQ52M93 769 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 LIPKQ5VXJ0 399 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 PACRGLQ8N7B6 248 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 STPG3Q8N7X2 389 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 TMEM203Q969S6 136 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 OR2A7Q96R45 310 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 DCUN1D5Q9BTE7 237 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 C5orf66Q9H5L9 145 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 PRELID3BQ9Y3B1 194 aa8.68□□□□□ -1.02
CNOT4-208ENST00000465721 TRBV7-1A0A0A6YYK4 115 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 IGHV3-35A0A0C4DH35 117 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 J3QRK9 145 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 RAB27BO00194 218 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 DHFRP00374 187 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 REG1AP05451 166 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 CLEC3BP05452 202 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 HIST1H1BP16401 226 aaKnown RBP8.67□□□□□ -1.02
CNOT4-208ENST00000465721 RPL35AP18077 110 aaKnown RBP8.67□□□□□ -1.02
CNOT4-208ENST00000465721 MAS1LP35410 378 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
CNOT4-208ENST00000465721 RPS25P62851 125 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms