RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 NHLRC4P0CG21 123 aaPredicted RBP13.09□□□□□ -0.31
TOM1-213ENST00000465529 AREGP15514 252 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 RPL27AP46776 148 aaKnown RBP13.09□□□□□ -0.31
TOM1-213ENST00000465529 RFX2P48378 723 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 SPAG16Q8N0X2 631 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 OR9G4Q8NGQ1 327 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 S100A16Q96FQ6 103 aaKnown RBP13.09□□□□□ -0.31
TOM1-213ENST00000465529 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 FUNDC2Q9BWH2 189 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 VCX3AQ9NNX9 186 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 IFT46Q9NQC8 304 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 EHFQ9NZC4 300 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 S4R3C0 116 aa13.09□□□□□ -0.31
TOM1-213ENST00000465529 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 CGB1A6NKQ9 187 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 CREBL2O60519 120 aaPredicted RBP13.08□□□□□ -0.32
TOM1-213ENST00000465529 IGHV3-23P01764 117 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 PMP2P02689 132 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 REG1AP05451 166 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 CBX5P45973 191 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 VBP1P61758 197 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 RPEL1Q2QD12 228 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 TMEM69Q5SWH9 247 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 OR4A47Q6IF82 309 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 ANKRD13BQ86YJ7 626 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 CROCCP3Q8IVE0 287 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 OR51H1Q8NH63 302 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
TOM1-213ENST00000465529 RYR3Q15413 4870 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 FAM223BA6NKX1 122 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 CSN3P07498 182 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 RPA2P15927 270 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 EDN2P20800 178 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 ATP5G2Q06055 141 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 FAM223AQ8IWN6 122 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 VSTM2AQ8TAG5 236 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 GIMAP1Q8WWP7 306 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 SLC25A46Q96AG3 418 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 NAA50Q9GZZ1 169 aaKnown RBP13.07□□□□□ -0.32
TOM1-213ENST00000465529 COMMD3Q9UBI1 195 aa13.07□□□□□ -0.32
TOM1-213ENST00000465529 IZUMO1RA6ND01 250 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 TMEM127O75204 238 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 S1PR2O95136 353 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 NDUFB8O95169 186 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 HRASP01112 189 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 HLA-AP01891 365 aaKnown RBP13.06□□□□□ -0.32
TOM1-213ENST00000465529 ZNF735P0CB33 412 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 GNRHRP30968 328 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 KIR2DS2P43631 304 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 MSMO1Q15800 293 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 C15orf32Q32M92 178 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 Q8N1Y9 231 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 FANCD2OSQ96PS1 177 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 ZNF2Q9BSG1 426 aaPredicted RBP13.06□□□□□ -0.32
TOM1-213ENST00000465529 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 HRASLSQ9HDD0 168 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 DMRT1Q9Y5R6 373 aa13.06□□□□□ -0.32
TOM1-213ENST00000465529 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.05□□□□□ -0.32
TOM1-213ENST00000465529 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 HLA-GP17693 338 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 HERV-K104P61576 105 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 RPL8P62917 257 aaKnown RBP13.05□□□□□ -0.32
TOM1-213ENST00000465529 AADACL3Q5VUY0 350 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 ADAMTSL5Q6ZMM2 481 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 ZBTB34Q8NCN2 500 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 BET1LQ9NYM9 111 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 FBXL7Q9UJT9 491 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 ZNF257Q9Y2Q1 563 aa13.05□□□□□ -0.32
TOM1-213ENST00000465529 DPPA5A6NC42 116 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 NPIPB5A8MRT5 1133 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 RLN1P04808 185 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 NAT1P18440 290 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 HLA-DMAP28067 261 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 PSMB6P28072 239 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 MAS1LP35410 378 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 CATR1Q13166 79 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 LYSMD2Q8IV50 215 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 NECAP1Q8NC96 275 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 OR5H2Q8NGV7 314 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 MOB3AQ96BX8 217 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 CCDC140Q96MF4 163 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 DNAH7Q8WXX0 4024 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 TENM3Q9P273 2699 aa13.04□□□□□ -0.32
TOM1-213ENST00000465529 UPK2O00526 184 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 RBFOX2O43251 390 aaKnown RBP eCLIP13.03□□□□□ -0.32
TOM1-213ENST00000465529 HPGDSO60760 199 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 HPRT1P00492 218 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 IGHV4-30-4P0DP06 118 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 CTRB1P17538 263 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 PRSS3P35030 304 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 HRH1P35367 487 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 TAS2R31P59538 309 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 OR2B8PP59922 312 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 CTRB2Q6GPI1 263 aa13.03□□□□□ -0.32
TOM1-213ENST00000465529 DHRS11Q6UWP2 260 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms