RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 SRRQ9GZT4 340 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 HRASLSQ9HDD0 168 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 SLC2A9Q9NRM0 540 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 MCUBQ9NWR8 336 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 ZNF580Q9UK33 172 aa9.1□□□□□ -0.95
CUX1-207ENST00000465461 HMX3A6NHT5 357 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 MPPED1O15442 326 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 RBFOX2O43251 390 aaKnown RBP eCLIP9.09□□□□□ -0.95
CUX1-207ENST00000465461 KBTBD11O94819 623 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 HRASP01112 189 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 IGLV1-40P01703 118 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 ELANEP08246 267 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 F2RP25116 425 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 G6PCP35575 357 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 ETV6P41212 452 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 RAB9AP51151 201 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 PIGPP57054 158 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 TMEM267Q0VDI3 215 aaPredicted RBP9.09□□□□□ -0.95
CUX1-207ENST00000465461 KLF9Q13886 244 aaPredicted RBP9.09□□□□□ -0.95
CUX1-207ENST00000465461 KIAA0141Q14154 515 aaPredicted RBP9.09□□□□□ -0.95
CUX1-207ENST00000465461 BAK1Q16611 211 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 DEFB136Q30KP8 78 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 CNPY1Q3B7I2 92 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 SPANXN2Q5MJ10 180 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 TMEM65Q6PI78 240 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 COMMD1Q8N668 190 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 DMBX1Q8NFW5 382 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 OR4F17Q8NGA8 305 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 TMEM167AQ8TBQ9 72 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 SRSF12Q8WXF0 261 aaKnown RBP9.09□□□□□ -0.95
CUX1-207ENST00000465461 OR4F4Q96R69 305 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 SDHCQ99643 169 aaPredicted RBP9.09□□□□□ -0.95
CUX1-207ENST00000465461 GNB4Q9HAV0 340 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 ZNF355PQ9NSJ1 428 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 FOXA2Q9Y261 457 aaPredicted RBP9.09□□□□□ -0.95
CUX1-207ENST00000465461 NSG2Q9Y328 171 aa9.09□□□□□ -0.95
CUX1-207ENST00000465461 A0A1B0GW64 132 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 KRASP01116 189 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 IGKV1-39P01597 117 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 PRH1P02810 166 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 IGKV1D-39P04432 117 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 NQO2P16083 231 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 TAS2R31P59538 309 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 SP6Q3SY56 376 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 AKIRIN2Q53H80 203 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 ETV3LQ6ZN32 361 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 C19orf35Q6ZS72 473 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 ZNF695Q8IW36 515 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 MMD2Q8IY49 270 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 TOMM5Q8N4H5 51 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 ZNF491Q8N8L2 437 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 RNF152Q8N8N0 203 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 CD300LFQ8TDQ1 290 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 FYTTD1Q96QD9 318 aaKnown RBP9.08□□□□□ -0.96
CUX1-207ENST00000465461 TP53RKQ96S44 253 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
CUX1-207ENST00000465461 ALX4Q9H161 411 aaPredicted RBP9.08□□□□□ -0.96
CUX1-207ENST00000465461 PLEKHA2Q9HB19 425 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 ZFP57Q9NU63 452 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 TMEM140Q9NV12 185 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 WNK1Q9H4A3 2382 aa9.08□□□□□ -0.96
CUX1-207ENST00000465461 TNCP24821 2201 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 LINC00854A0A1B0GVQ3 168 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 CGB1A6NKQ9 187 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 MARCH11A6NNE9 402 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 UPK2O00526 184 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 ACTL6BO94805 426 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 IGHV3-11P01762 117 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 PF4P02776 101 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 CTSDP07339 412 aaPredicted RBP9.07□□□□□ -0.96
CUX1-207ENST00000465461 IL6RP08887 468 aaPredicted RBP9.07□□□□□ -0.96
CUX1-207ENST00000465461 OR9G9P0C7N8 305 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 PTBP1P26599 531 aaKnown RBP eCLIP9.07□□□□□ -0.96
CUX1-207ENST00000465461 S100GP29377 79 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 TPPP2P59282 170 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 RND3P61587 244 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 ZNF57Q68EA5 555 aaPredicted RBP9.07□□□□□ -0.96
CUX1-207ENST00000465461 C1QL4Q86Z23 238 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 ADAD2Q8NCV1 583 aaKnown RBP9.07□□□□□ -0.96
CUX1-207ENST00000465461 VSTM2AQ8TAG5 236 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 ZFAND1Q8TCF1 268 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 RAX2Q96IS3 184 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 C5orf66Q9H5L9 145 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 BET1LQ9NYM9 111 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 COPZ2Q9P299 210 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 GPR132Q9UNW8 380 aa9.07□□□□□ -0.96
CUX1-207ENST00000465461 C3orf85A0A1B0GTC6 90 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 TEX22C9J3V5 150 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 RBMXL2O75526 392 aaKnown RBP9.06□□□□□ -0.96
CUX1-207ENST00000465461 TRGV3P03979 118 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 HLA-GP17693 338 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 RPL27AP46776 148 aaKnown RBP9.06□□□□□ -0.96
CUX1-207ENST00000465461 CDX1P47902 265 aaPredicted RBP9.06□□□□□ -0.96
CUX1-207ENST00000465461 ERVK-16P61578 105 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 RPL8P62917 257 aaKnown RBP9.06□□□□□ -0.96
CUX1-207ENST00000465461 POU2AF1Q16633 256 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 IZUMO4Q1ZYL8 232 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 TCTEX1D1Q8N7M0 179 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 OR5M8Q8NGP6 311 aa9.06□□□□□ -0.96
CUX1-207ENST00000465461 MYOZ3Q8TDC0 251 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms