RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 SUB1P53999 127 aaKnown RBP eCLIP3.12□□□□□ -1.91
UBR4-209ENST00000465036 ACTBP60709 375 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 ACTG1P63261 375 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 SRPXP78539 464 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 CDK5Q00535 292 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 ZNF92Q03936 586 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 DYNC1I2Q13409 638 aaKnown RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 ATP6AP1Q15904 470 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 SNCBQ16143 134 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 BSXQ3C1V8 233 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 COX19Q49B96 90 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 KLHL12Q53G59 568 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 RBM48Q5RL73 367 aaKnown RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 FAM201AQ5SY85 155 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 GLYATL3Q5SZD4 288 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 TPTE2P1Q5T6R2 138 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 OLFML2AQ68BL7 652 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 CYB5R2Q6BCY4 276 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 RPL13AP3Q6NVV1 102 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 WDR82Q6UXN9 313 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 FBXW12Q6X9E4 464 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 Q6ZN92 141 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 C19orf18Q8NEA5 215 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 OR2Z1Q8NG97 314 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 OR2T4Q8NH00 348 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 OR5K1Q8NHB7 308 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 ZNF420Q8TAQ5 688 aaPredicted RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 ITLN1Q8WWA0 313 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 CCL17Q92583 94 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 RORBQ92753 470 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 RDH5Q92781 318 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 SLAMF6Q96DU3 332 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 SLC25A38Q96DW6 304 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 ZNF799Q96GE5 643 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 SCGB3A2Q96PL1 93 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 OR2V2Q96R30 315 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 TTTY10Q9BZA0 68 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 MYOZ1Q9NP98 299 aaPredicted RBP3.12□□□□□ -1.91
UBR4-209ENST00000465036 TVP23BQ9NYZ1 205 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 KCNIP1Q9NZI2 227 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 DNAJC27Q9NZQ0 273 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 Q9UF83 564 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 BAIAP2Q9UQB8 552 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 AP4S1Q9Y587 144 aa3.12□□□□□ -1.91
UBR4-209ENST00000465036 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.11□□□□□ -1.914e-34■■■■■ 48.9
UBR4-209ENST00000465036 IGHV1-69-2A0A0G2JMI3 117 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 IQCF6A8MYZ5 107 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ANKRD65E5RJM6 399 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 F5H5P2 479 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 G3V2T6 193 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 GATCO43716 136 aaKnown RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 CYB5R3P00387 301 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 IFNGP01579 166 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 IFNA6P05013 189 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ARG1P05089 322 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 RPSAP08865 295 aaKnown RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 IGFBP3P17936 291 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 RAB4AP20338 218 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 MAS1LP35410 378 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 RAB7AP51149 207 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 RIDAP52758 137 aaKnown RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 NDUFV3P56181 108 aaKnown RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 TMEM33P57088 247 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ELF3P78545 371 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 TNFAIP6P98066 277 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 ST3GAL4Q11206 333 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 APOFQ13790 326 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ZNF146Q15072 292 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 PSG5Q15238 335 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 MPPED2Q15777 294 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 TEX30Q5JUR7 227 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 RSBN1Q5VWQ0 802 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 C12orf73Q69YU5 71 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 KDM4DQ6B0I6 523 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ARL9Q6T311 187 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 LRRN1Q6UXK5 716 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 CCDC121Q6ZUS5 278 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 WDR86Q86TI4 376 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 HIPK1Q86Z02 1210 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ZNF283Q8N7M2 679 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 OR8G5Q8NG78 346 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 RNF133Q8WVZ7 376 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 POP5Q969H6 163 aaKnown RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 APOBEC3DQ96AK3 386 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 FLYWCH2Q96CP2 140 aaKnown RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 ADTRPQ96IZ2 230 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 NICN1Q9BSH3 213 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 FGF23Q9GZV9 251 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 GABARAPL1Q9H0R8 117 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 SPATA2Q9UM82 520 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ZNF256Q9Y2P7 627 aaPredicted RBP3.11□□□□□ -1.91
UBR4-209ENST00000465036 LRRC42Q9Y546 428 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 ARHGAP32A7KAX9 2087 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 MXRA5Q9NR99 2828 aa3.11□□□□□ -1.91
UBR4-209ENST00000465036 COL6A5A8TX70 2615 aa3.1□□□□□ -1.91
UBR4-209ENST00000465036 A0A1B0GVI7 797 aa3.1□□□□□ -1.91
UBR4-209ENST00000465036 ISPDA4D126 451 aa3.1□□□□□ -1.91
UBR4-209ENST00000465036 CD300LBA8K4G0 201 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms