RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TMEM128Q5BJH2 165 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 ZNF562Q6V9R5 426 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 SGPP2Q8IWX5 399 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 CADM3Q8N126 398 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 CENPSQ8N2Z9 138 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 NOL4LQ96MY1 436 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-202ENST00000461433 OR51J1Q9H342 316 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 ZNF430Q9H8G1 570 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-202ENST00000461433 BET1LQ9NYM9 111 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 PRR13Q9NZ81 148 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 LINC00527Q9UJ94 153 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 TENM1Q9UKZ4 2725 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 COL6A5A8TX70 2615 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 ATP6V0E1O15342 81 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 KCNAB3O43448 404 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 IGKV1-5P01602 117 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 IGF1P05019 195 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 SERPINE2P07093 398 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 P0C879 139 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 PPP1R1AQ13522 171 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 MZT2BQ6NZ67 158 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 VSTM2AQ8TAG5 236 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM56Q96MV1 263 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 AIFM2Q9BRQ8 373 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 C20orf85Q9H1P6 137 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM140Q9NV12 185 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM56-RWDD3S4R434 201 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 TET2Q6N021 2002 aaPredicted RBP8.87□□□□□ -0.99
SSBP1-202ENST00000461433 FAM240BA0A1B0GVZ2 78 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 AP4M1O00189 453 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 UPK2O00526 184 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 OR9G9P0C7N8 305 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 ANXA7P20073 488 aaKnown RBP8.87□□□□□ -0.99
SSBP1-202ENST00000461433 FXYD3Q14802 87 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 C19orf54Q5BKX5 351 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 C10orf99Q6UWK7 81 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 NRARPQ7Z6K4 114 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 SELENOHQ8IZQ5 122 aaKnown RBP8.87□□□□□ -0.99
SSBP1-202ENST00000461433 STPG2Q8N412 459 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 DUSP18Q8NEJ0 188 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 DMBX1Q8NFW5 382 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 OR4A5Q8NH83 315 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 ZNF580Q9UK33 172 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 KCNIP3Q9Y2W7 256 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 NUBP2Q9Y5Y2 271 aa8.87□□□□□ -0.99
SSBP1-202ENST00000461433 TRAV6A0A075B6T7 132 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 A0A0G2JRQ6 117 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 A0A1B0GW64 132 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 E7EUB6 86 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 G3V318 75 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 SFT2D2O95562 160 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 MYOD1P15172 320 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 MECP2P51608 486 aaKnown RBP8.86□□□□□ -0.99
SSBP1-202ENST00000461433 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-202ENST00000461433 UBE2MP61081 183 aaKnown RBP8.86□□□□□ -0.99
SSBP1-202ENST00000461433 CFHR3Q02985 330 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 SRSF4Q08170 494 aaKnown RBP8.86□□□□□ -0.99
SSBP1-202ENST00000461433 TRIM16LQ309B1 348 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 ARSJQ5FYB0 599 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-202ENST00000461433 FOXRED2Q8IWF2 684 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 MMD2Q8IY49 270 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 KLHDC1Q8N7A1 406 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 WFDC12Q8WWY7 111 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 FAM103A1Q9BTL3 118 aaKnown RBP8.86□□□□□ -0.99
SSBP1-202ENST00000461433 ALX4Q9H161 411 aaPredicted RBP8.86□□□□□ -0.99
SSBP1-202ENST00000461433 PARP11Q9NR21 331 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 NUDT15Q9NV35 164 aa8.86□□□□□ -0.99
SSBP1-202ENST00000461433 C9orf170A2RU37 121 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 CGB1A6NKQ9 187 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 OR4E1P0C645 316 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 PPIFP30405 207 aaKnown RBP8.85□□□□□ -0.99
SSBP1-202ENST00000461433 ERVK-16P61578 105 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 GNB1P62873 340 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 TNXAQ16473 311 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 IZUMO4Q1ZYL8 232 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 ANKRD55Q3KP44 614 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 C10orf55Q5SWW7 151 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 ASPHD1Q5U4P2 390 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 SGMS2Q8NHU3 365 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 ARPC1AQ92747 370 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 RBPMSQ93062 196 aaKnown RBP8.85□□□□□ -0.99
SSBP1-202ENST00000461433 NSG2Q9Y328 171 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 WSB1Q9Y6I7 421 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 DBX1A6NMT0 343 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 CNIH1O95406 144 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 FGF2P09038 288 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 H2AFB2P0C5Z0 115 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 HLA-GP17693 338 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 VAMP1P23763 118 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 MAS1LP35410 378 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 DEFA1P59665 94 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 DEFA3P59666 94 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 RPL8P62917 257 aaKnown RBP8.85□□□□□ -0.99
SSBP1-202ENST00000461433 TCTEX1D4Q5JR98 221 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM268Q5VZI3 342 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 Q6ZRM9 215 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 H2BFWTQ7Z2G1 175 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 CENPVQ7Z7K6 275 aaPredicted RBP8.85□□□□□ -0.99
SSBP1-202ENST00000461433 ZNF329Q86UD4 541 aa8.85□□□□□ -0.99
SSBP1-202ENST00000461433 ZNF695Q8IW36 515 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms