RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 ABCG5Q9H222 651 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 DUSP21Q9H596 190 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 BATF3Q9NR55 127 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 UQCC1Q9NVA1 299 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 C14orf105Q9NVL8 296 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 ASF1BQ9NVP2 202 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 MRPL27Q9P0M9 148 aaKnown RBP1.06□□□□□ -2.24
SYPL1-203ENST00000460770 OPTCQ9UBM4 332 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 AK3Q9UIJ7 227 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 MCTS1Q9ULC4 181 aaKnown RBP1.06□□□□□ -2.24
SYPL1-203ENST00000460770 ZNF443Q9Y2A4 671 aaPredicted RBP1.06□□□□□ -2.24
SYPL1-203ENST00000460770 COQ4Q9Y3A0 265 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 GREB1Q4ZG55 1949 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 PTPRBP23467 1997 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 SCN9AQ15858 1988 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 THSD7AQ9UPZ6 1657 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 CCDC144AA2RUR9 1427 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 WRNQ14191 1432 aaPredicted RBP eCLIP1.06□□□□□ -2.24
SYPL1-203ENST00000460770 MYO9BQ13459 2157 aa1.06□□□□□ -2.24
SYPL1-203ENST00000460770 SIPA1L1O43166 1804 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 GRIN2BQ13224 1484 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 NYNRINQ9P2P1 1898 aaKnown RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 PTPRSQ13332 1948 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 CEP170Q5SW79 1584 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 IGHV3-73A0A0B4J1V6 119 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 LOC102725191A0A1B0GVB3 256 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 hADV38S2A0JD32 116 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 C19orf71A6NCJ1 209 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 A8MUN3 132 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 GGTLC3B5MD39 225 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 C9JCJ5 164 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 H3BQV1 296 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 C15orf65H3BRN8 121 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 I3L521 148 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 LST1O00453 97 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 FAAHO00519 579 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TXNDC9O14530 226 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 LY6HO94772 140 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 SOD1P00441 154 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 IGHV3-30-3P0DP02 117 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 CRYBB3P26998 211 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 CD200P41217 278 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 LPAR6P43657 344 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 RPL5P46777 297 aaKnown RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 GABRA2P47869 451 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 RAB13P51153 203 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 ZNF140P52738 457 aaPredicted RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 FOXA1P55317 472 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 SNRPD2P62316 118 aaKnown RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TBPL1P62380 186 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 POLR2GP62487 172 aaKnown RBP eCLIP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 SARNPP82979 210 aaKnown RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TNFAIP6P98066 277 aaPredicted RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 RUNX1Q01196 453 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 FLI1Q01543 452 aaPredicted RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 IL15RAQ13261 267 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 KRR1Q13601 381 aaKnown RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 CST6Q15828 149 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 IAH1Q2TAA2 248 aaPredicted RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TNFAIP8L3Q5GJ75 292 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 GLT8D1Q68CQ7 371 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TMEM42Q69YG0 159 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 AMMECR1LQ6DCA0 310 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 ZFAND6Q6FIF0 208 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 SDIM1Q6ZPB5 146 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 SPATA12Q7Z6I5 190 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 LYPD6Q86Y78 171 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 MSRB3Q8IXL7 192 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 C1orf158Q8N1D5 194 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TBC1D19Q8N5T2 526 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 C1orf64Q8NEQ6 169 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 OR11H1Q8NG94 326 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 OR51A2Q8NGJ7 313 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 OR4X1Q8NH49 305 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 SGMS2Q8NHU3 365 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 FNDC9Q8TBE3 224 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 NEK7Q8TDX7 302 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 DYDC1Q8WWB3 177 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 ROPN1LQ96C74 230 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 ZHX1-C8orf76Q96EF9 292 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 IGF2BP2-AS1Q96M15 143 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 OR8B2Q96RD0 313 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 HOPXQ9BPY8 73 aaPredicted RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 MND1Q9BWT6 205 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 PRTFDC1Q9NRG1 225 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 ARMC1Q9NVT9 282 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 PAQR5Q9NXK6 330 aaPredicted RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 IDI2-AS1Q9NZ38 188 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TAAR3PQ9P1P4 343 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 ZNF391Q9UJN7 358 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 VPREB3Q9UKI3 123 aa1.05□□□□□ -2.24
SYPL1-203ENST00000460770 UTP11Q9Y3A2 253 aaKnown RBP1.05□□□□□ -2.24
SYPL1-203ENST00000460770 TRPM3Q9HCF6 1732 aaPredicted RBP1.04□□□□□ -2.24
SYPL1-203ENST00000460770 MAST2Q6P0Q8 1798 aa1.04□□□□□ -2.24
SYPL1-203ENST00000460770 ZNF106Q9H2Y7 1883 aaKnown RBP1.04□□□□□ -2.24
SYPL1-203ENST00000460770 TRBV20OR9-2A0A075B6H5 130 aa1.04□□□□□ -2.24
SYPL1-203ENST00000460770 hCG_1818297A0A087WSY0 165 aa1.04□□□□□ -2.24
SYPL1-203ENST00000460770 A0A087WUU8 490 aa1.04□□□□□ -2.24
SYPL1-203ENST00000460770 TRAV26-2A0A0B4J265 109 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms