RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 MAS1LP35410 378 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 TMEM267Q0VDI3 215 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-209ENST00000460573 FXYD3Q14802 87 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 SSX9Q7RTT3 188 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 SGPP2Q8IWX5 399 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 COMMD1Q8N668 190 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 DMBX1Q8NFW5 382 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 OR5AU1Q8NGC0 362 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 NAA60Q9H7X0 242 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 KCNIP3Q9Y2W7 256 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 MARCH11A6NNE9 402 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 PLA2G10O15496 165 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 LYRM1O43325 122 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 ACTL6BO94805 426 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 ATG12O94817 140 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 KRTAP10-3P60369 221 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 PJVKQ0ZLH3 352 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 MRGPRG-AS1Q2M3A8 158 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 OR4A47Q6IF82 309 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 OR4X2Q8NGF9 303 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 ARPC1AQ92747 370 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 TP53RKQ96S44 253 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 ZNF430Q9H8G1 570 aaPredicted RBP17.67■□□□□ 0.42
C9orf3-209ENST00000460573 LINC00527Q9UJ94 153 aa17.67■□□□□ 0.42
C9orf3-209ENST00000460573 NDUFB6O95139 128 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 IL6RP08887 468 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-209ENST00000460573 UCP1P25874 307 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 DEFA1P59665 94 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 DEFA3P59666 94 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 GNB1P62873 340 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 NDPQ00604 133 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 DHODHQ02127 395 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 TNXAQ16473 311 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 AKIRIN2Q53H80 203 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 ABHD5Q8WTS1 349 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 GALNT14Q96FL9 552 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 TMEM68Q96MH6 324 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 TMEM140Q9NV12 185 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 NUBP2Q9Y5Y2 271 aa17.66■□□□□ 0.42
C9orf3-209ENST00000460573 TRAV41A0A0B4J266 112 aa17.65■□□□□ 0.42
C9orf3-209ENST00000460573 ARPC1BO15143 372 aaKnown RBP17.65■□□□□ 0.42
C9orf3-209ENST00000460573 FBXO24O75426 580 aa17.65■□□□□ 0.42
C9orf3-209ENST00000460573 KRASP01116 189 aa17.65■□□□□ 0.42
C9orf3-209ENST00000460573 CCR6P51684 374 aa17.65■□□□□ 0.42
C9orf3-209ENST00000460573 TEX38Q6PEX7 206 aa17.65■□□□□ 0.42
C9orf3-209ENST00000460573 ADAD2Q8NCV1 583 aaKnown RBP17.65■□□□□ 0.42
C9orf3-209ENST00000460573 TMEM222Q9H0R3 208 aa17.65■□□□□ 0.42
C9orf3-209ENST00000460573 MGAM2Q2M2H8 2515 aa17.65■□□□□ 0.42
C9orf3-209ENST00000460573 UPK2O00526 184 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 WIPF1O43516 503 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 OR5AC1P0C628 307 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 EGR2P11161 476 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-209ENST00000460573 AKR1C4P17516 323 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 BTCP35070 178 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 RPL8P62917 257 aaKnown RBP17.64■□□□□ 0.41
C9orf3-209ENST00000460573 SSBP2P81877 361 aaPredicted RBP17.64■□□□□ 0.41
C9orf3-209ENST00000460573 CFHR3Q02985 330 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 RGS21Q2M5E4 152 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 TRIM16LQ309B1 348 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 TMEM128Q5BJH2 165 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 MINDY2Q8NBR6 621 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 TMEM230Q96A57 120 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 SEC22AQ96IW7 307 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 FBXO7Q9Y3I1 522 aa17.64■□□□□ 0.41
C9orf3-209ENST00000460573 CDS2O95674 445 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 IGKV1-39P01597 117 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 IGKV1D-39P04432 117 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 ANXA3P12429 323 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 G6PCP35575 357 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 SP6Q3SY56 376 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 MZT2BQ6NZ67 158 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 TMED4Q7Z7H5 227 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 ZNF329Q86UD4 541 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 CENPSQ8N2Z9 138 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 GRPEL2Q8TAA5 225 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 GLYATL2Q8WU03 294 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 SRSF12Q8WXF0 261 aaKnown RBP17.63■□□□□ 0.41
C9orf3-209ENST00000460573 WSB1Q9Y6I7 421 aa17.63■□□□□ 0.41
C9orf3-209ENST00000460573 PIGBOS1A0A0B4J2F0 54 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 IGHG4P01861 327 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 ELANEP08246 267 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 CD28P10747 220 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 PPIFP30405 207 aaKnown RBP17.62■□□□□ 0.41
C9orf3-209ENST00000460573 UBE2MP61081 183 aaKnown RBP17.62■□□□□ 0.41
C9orf3-209ENST00000460573 CD83Q01151 205 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 IFITM3Q01628 133 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 ASAH1Q13510 395 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 ECSCRQ19T08 205 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 C19orf54Q5BKX5 351 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 UNQ5815/PRO19632Q6UWF5 114 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 H2BFWTQ7Z2G1 175 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 SPIN2AQ99865 258 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 SPIN2BQ9BPZ2 258 aa17.62■□□□□ 0.41
C9orf3-209ENST00000460573 FAM103A1Q9BTL3 118 aaKnown RBP17.62■□□□□ 0.41
C9orf3-209ENST00000460573 G3V318 75 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 SNAPC5O75971 98 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 OPN1MWP04001 364 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 OPN1MW2P0DN77 364 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 OPN1MW3P0DN78 364 aa17.61■□□□□ 0.41
C9orf3-209ENST00000460573 HLA-GP17693 338 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms