RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SMLR1H3BR10 107 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TEX46H3BTG2 121 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 CORTO00230 105 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TIMM23O14925 209 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 SMAD7O15105 426 aaKnown RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 NBR2O15453 112 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 SLC25A17O43808 307 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 NXPH3O95157 252 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGKV1D-33P01593 117 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGKV1-33P01594 117 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGLV2-14P01704 120 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 MBPP02686 304 aaPredicted RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 DEFA4P12838 97 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TPT1P13693 172 aaKnown RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 HOXB4P17483 251 aaPredicted RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 SAA4P35542 130 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 HTR2BP41595 481 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 RAB2AP61019 212 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 HSPE1P61604 102 aaKnown RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 GNB1P62873 340 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 RPL30P62888 115 aaKnown RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 ID3Q02535 119 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TNFRSF9Q07011 255 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TMEM267Q0VDI3 215 aaPredicted RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 HNF4GQ14541 408 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TNXAQ16473 311 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 ATP6V1FQ16864 119 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TMEM249Q2WGJ8 235 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZNF585BQ52M93 769 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 NMSQ5H8A3 153 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 TMUB2Q71RG4 321 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 SLC51BQ86UW2 128 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZNF429Q86V71 674 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 PPP1R27Q86WC6 154 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 THNSL2Q86YJ6 484 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 ODF3L1Q8IXM7 274 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 Q8N7P7 452 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR4P4Q8NGL7 312 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR1L6Q8NGR2 347 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 LRRC20Q8TCA0 184 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 CYYR1Q96J86 154 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 SMIM8Q96KF7 97 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 MAGT1Q9H0U3 335 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 MMP26Q9NRE1 261 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 THYN1Q9P016 225 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 METTL1Q9UBP6 276 aaKnown RBP4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGSF10Q6WRI0 2623 aa4.74□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGHV3-72A0A0B4J1Y9 119 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 CENPVL3A0A0U1RRI6 287 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 RPS10-NUDT3A0A1W2PQS6 291 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 FAM181BA6NEQ2 426 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 C15orf61A6NNL5 157 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 MPTX1A8MV57 137 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 RNASEK-C17orf49H0YIS7 233 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 UPK2O00526 184 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 SAA1P0DJI8 122 aaPredicted RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 S100A7P31151 101 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 SULT1A1P50225 295 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 NKX2-5P52952 324 aaPredicted RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 POLR2GP62487 172 aaKnown RBP eCLIP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 UBA52P62987 128 aaKnown RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 KLRD1Q13241 179 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 OPCMLQ14982 345 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 POU2AF1Q16633 256 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 LRRC75BQ2VPJ9 315 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 CXorf66Q5JRM2 361 aaPredicted RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 SPNS3Q6ZMD2 512 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 ZNF767PQ75MW2 155 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 S100A7AQ86SG5 101 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 VKORC1L1Q8N0U8 176 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 C11orf42Q8N5U0 333 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 OR4D5Q8NGN0 318 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 LHFPL5Q8TAF8 219 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 TMEM167AQ8TBQ9 72 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 DDB2Q92466 427 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 ST6GALNAC6Q969X2 333 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 GNPNAT1Q96EK6 184 aaPredicted RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 QTRT1Q9BXR0 403 aaKnown RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 RBKSQ9H477 322 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 KCNIP2Q9NS61 270 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 LYRM2Q9NU23 88 aaPredicted RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 HSPB7Q9UBY9 170 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 UBQLN2Q9UHD9 624 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 TNFSF18Q9UNG2 199 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 FOXA2Q9Y261 457 aaPredicted RBP4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 FBXO7Q9Y3I1 522 aa4.73□□□□□ -1.65
RNU1-88P-201ENST00000459274 DOPEY1Q5JWR5 2465 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 AKAP6Q13023 2319 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 SMCO3A2RU48 225 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 ODF3BA8MYP8 253 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 RRHO14718 337 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 BCL2L11O43521 198 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 SOX15O60248 233 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 VENTXO95231 258 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGKV1-5P01602 117 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 IGKV1-16P04430 117 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 CRYBA1P05813 215 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 FABP1P07148 127 aa4.72□□□□□ -1.65
RNU1-88P-201ENST00000459274 IAPPP10997 89 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms