RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 SETD5Q9C0A6 1442 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 STRCQ7RTU9 1775 aa0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 EIF4G1Q04637 1599 aaKnown RBP0.44□□□□□ -2.34
SCARNA18-201ENST00000459004 TMEM269A0A1B0GVZ9 245 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 GOLGA6L10A6NI86 522 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 GEMIN2O14893 280 aaKnown RBP0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 CCL5P13501 91 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 HIST1H1CP16403 213 aaKnown RBP0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 HAAOP46952 286 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 HADHBP55084 474 aaKnown RBP0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 CLDN12P56749 244 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 JOSD1Q15040 202 aaPredicted RBP0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 SAPCD1Q5SSQ6 148 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 OR8B3Q8NGG8 313 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 ACOT12Q8WYK0 555 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 GNPNAT1Q96EK6 184 aaPredicted RBP0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 REG4Q9BYZ8 158 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 MS4A6AQ9H2W1 248 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 EURLQ9NYK6 297 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 GMEB1Q9Y692 573 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 LHFPL6Q9Y693 200 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 KIAA2026Q5HYC2 2103 aa0.43□□□□□ -2.34
SCARNA18-201ENST00000459004 GREB1Q4ZG55 1949 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 TRAPPC2LH3BP13 241 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 SDCBPO00560 298 aaPredicted RBP0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 TFPTP0C1Z6 253 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 PET100P0DJ07 73 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 DDTP30046 118 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 CXCR4P61073 352 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 RPL30P62888 115 aaKnown RBP0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 PMS2P3Q13401 168 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 NDUFA5Q16718 116 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 DNM1P34Q6PK57 102 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 FAM19A5Q7Z5A7 132 aaPredicted RBP0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 UBL4BQ8N7F7 174 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 C12orf29Q8N999 325 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 HAVCR2Q8TDQ0 301 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 PACRGQ96M98 296 aaPredicted RBP0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 HRASLSQ9HDD0 168 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 PRELID1Q9Y255 219 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 TIMM22Q9Y584 194 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 HEATR5BQ9P2D3 2071 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 TONSLQ96HA7 1378 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 ROS1P08922 2347 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 MICAL3Q7RTP6 2002 aa0.42□□□□□ -2.34
SCARNA18-201ENST00000459004 TRBV10-2A0A0K0K1G8 114 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 NSA2O95478 260 aaKnown RBP0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 KRT75O95678 551 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 SBSNQ6UWP8 590 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 SSX8Q7RTT4 187 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 DHFR2Q86XF0 187 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 CD302Q8IX05 232 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 FAM19A2Q8N3H0 131 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 SLC22A24Q8N4F4 322 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 ZNF565Q8N9K5 539 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 OR7G1Q8NGA0 311 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 DHRS9Q9BPW9 319 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 MRPL57Q9BQC6 102 aaKnown RBP0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 SPANXB1Q9NS25 103 aaPredicted RBP0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 KIF24Q5T7B8 1368 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 RTTNQ86VV8 2226 aa0.41□□□□□ -2.34
SCARNA18-201ENST00000459004 HMCN1Q96RW7 5635 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 TINCRA0A1B0GVN0 87 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 TRPC5OSA6NMA1 111 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 IQCF5A8MTL0 148 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 LEPROTO15243 131 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 RNASE3P12724 160 aaKnown RBP0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 CDK10Q15131 360 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 SDHAF4Q5VUM1 108 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 TEX36Q5VZQ5 186 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 C5orf46Q6UWT4 87 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 SYCE1Q8N0S2 351 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 TBC1D19Q8N5T2 526 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 ZNF439Q8NDP4 499 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 OR2T27Q8NH04 317 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 JOSD2Q8TAC2 188 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 BBS2Q9BXC9 721 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 DERL2Q9GZP9 239 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 TRABDQ9H4I3 376 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 SPACA1Q9HBV2 294 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 GPR84Q9NQS5 396 aa0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 ZNF469Q96JG9 3925 aaPredicted RBP0.4□□□□□ -2.35
SCARNA18-201ENST00000459004 SYNRGQ9UMZ2 1314 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 ITGB1BP1O14713 200 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 SLC22A1O15245 554 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 HPGDSO60760 199 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 UBBP0CG47 229 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 SULT1A3P0DMM9 295 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 SULT1A4P0DMN0 295 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 CSN1S1P47710 185 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 RAB13P51153 203 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 ZNF676Q8N7Q3 588 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 SGMS2Q8NHU3 365 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 EEF1AKMT1Q8WVE0 214 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 SERPINI1Q99574 410 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 YIPF3Q9GZM5 350 aa0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 RSL24D1Q9UHA3 163 aaKnown RBP0.39□□□□□ -2.35
SCARNA18-201ENST00000459004 ANAPC10Q9UM13 185 aa0.39□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms