RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 RPL27AP46776 148 aaKnown RBP13.91□□□□□ -0.18
MSH6-206ENST00000455383 FABP5Q01469 135 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 ARFRP1Q13795 201 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 TM4SF20Q53R12 229 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 HES5Q5TA89 166 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 OR4A47Q6IF82 309 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 KCTD9Q7L273 389 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 VKORC1L1Q8N0U8 176 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 OR2A7Q96R45 310 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 DCUN1D5Q9BTE7 237 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 RBMX2Q9Y388 322 aaKnown RBP13.91□□□□□ -0.18
MSH6-206ENST00000455383 VPS13DQ5THJ4 4388 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 CASQ2O14958 399 aaPredicted RBP13.9□□□□□ -0.18
MSH6-206ENST00000455383 KBTBD11O94819 623 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 SCAF4O95104 1147 aaKnown RBP13.9□□□□□ -0.18
MSH6-206ENST00000455383 HLA-DQB1P01920 261 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 CTRB1P17538 263 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 RAB6AP20340 208 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 PSMB6P28072 239 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 MAS1LP35410 378 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 MLLT11Q13015 90 aaPredicted RBP13.9□□□□□ -0.18
MSH6-206ENST00000455383 EIF4EBP1Q13541 118 aaPredicted RBP13.9□□□□□ -0.18
MSH6-206ENST00000455383 RCN1Q15293 331 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 SSX1Q16384 188 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 CTRB2Q6GPI1 263 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 BTNL8Q6UX41 500 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 Q6ZWC4 215 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 VSTM2AQ8TAG5 236 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 EEF1AKMT3Q96AZ1 226 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 SCN3BQ9NY72 215 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 MRPS7Q9Y2R9 242 aaKnown RBP13.9□□□□□ -0.18
MSH6-206ENST00000455383 PRELID3BQ9Y3B1 194 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 OR2W1Q9Y3N9 320 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 S4R3C0 116 aa13.9□□□□□ -0.18
MSH6-206ENST00000455383 ZNF320A2RRD8 509 aa13.89□□□□□ -0.19
MSH6-206ENST00000455383 AREGP15514 252 aa13.89□□□□□ -0.19
MSH6-206ENST00000455383 HIST1H1BP16401 226 aaKnown RBP13.89□□□□□ -0.19
MSH6-206ENST00000455383 BMI1P35226 326 aa13.89□□□□□ -0.19
MSH6-206ENST00000455383 BRWD1-AS2P59051 145 aa13.89□□□□□ -0.19
MSH6-206ENST00000455383 UNQ9165/PRO28630Q6UXU0 137 aa13.89□□□□□ -0.19
MSH6-206ENST00000455383 MARC2Q969Z3 335 aa13.89□□□□□ -0.19
MSH6-206ENST00000455383 DUSP21Q9H596 190 aa13.89□□□□□ -0.19
MSH6-206ENST00000455383 IGLV11-55A0A075B6I3 123 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 A0A075B6Q4 140 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 DPPA5A6NC42 116 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 SPRY2O43597 315 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 SLC22A5O76082 557 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 HSMCR30P0CW71 290 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 CD36P16671 472 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 GALP22466 123 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 DTYMKP23919 212 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 TALDO1P37837 337 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 OR2B11Q5JQS5 317 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 RPP25LQ8N5L8 163 aaKnown RBP13.88□□□□□ -0.19
MSH6-206ENST00000455383 HSD17B10Q99714 261 aaKnown RBP13.88□□□□□ -0.19
MSH6-206ENST00000455383 ACOT13Q9NPJ3 140 aa13.88□□□□□ -0.19
MSH6-206ENST00000455383 ELF5Q9UKW6 265 aaPredicted RBP13.88□□□□□ -0.19
MSH6-206ENST00000455383 TRBV7-1A0A0A6YYK4 115 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 IGKV1D-13A0A0B4J2D9 117 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 CGB1A6NKQ9 187 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 IFITM5A6NNB3 132 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 J3QRK9 145 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 UBE2CO00762 179 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 DHFRP00374 187 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 CTXN2P0C2S0 81 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 IGKV1-13P0DP09 117 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 ELLP55199 621 aaPredicted RBP13.87□□□□□ -0.19
MSH6-206ENST00000455383 OR10A3P58181 314 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 OR1L6Q8NGR2 347 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 OR4S2Q8NH73 311 aa13.87□□□□□ -0.19
MSH6-206ENST00000455383 MRPL27Q9P0M9 148 aaKnown RBP13.87□□□□□ -0.19
MSH6-206ENST00000455383 KLK5Q9Y337 293 aaPredicted RBP13.87□□□□□ -0.19
MSH6-206ENST00000455383 TRAV1-2A0A0B4J238 106 aa13.86□□□□□ -0.19
MSH6-206ENST00000455383 MFSD2BA6NFX1 497 aa13.86□□□□□ -0.19
MSH6-206ENST00000455383 CLEC3BP05452 202 aa13.86□□□□□ -0.19
MSH6-206ENST00000455383 NFYAP23511 347 aaPredicted RBP13.86□□□□□ -0.19
MSH6-206ENST00000455383 APOC4P55056 127 aa13.86□□□□□ -0.19
MSH6-206ENST00000455383 OR2C3Q8N628 320 aa13.86□□□□□ -0.19
MSH6-206ENST00000455383 CXorf58Q96LI9 332 aa13.86□□□□□ -0.19
MSH6-206ENST00000455383 MGLLQ99685 303 aa13.86□□□□□ -0.19
MSH6-206ENST00000455383 KIR2DL5BA0A0G2JN68 375 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 KIR2DL5BA0A0G2JPC4 375 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 METTL21EPA6NDL7 271 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 EBAG9O00559 213 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 ARL6IP1Q15041 203 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 ZNF585BQ52M93 769 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 RBPMS2Q6ZRY4 209 aaKnown RBP13.85□□□□□ -0.19
MSH6-206ENST00000455383 KIR2DL5AQ8N109 375 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 KIR2DL5BQ8NHK3 375 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 ZNF502Q8TBZ5 544 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 RNF183Q96D59 192 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 SPAG8Q99932 426 aaPredicted RBP13.85□□□□□ -0.19
MSH6-206ENST00000455383 C5orf66Q9H5L9 145 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 TPRKBQ9Y3C4 175 aa13.85□□□□□ -0.19
MSH6-206ENST00000455383 PDCD5O14737 125 aa13.84□□□□□ -0.19
MSH6-206ENST00000455383 MYOD1P15172 320 aa13.84□□□□□ -0.19
MSH6-206ENST00000455383 RPL8P62917 257 aaKnown RBP13.84□□□□□ -0.19
MSH6-206ENST00000455383 DEFB135Q30KP9 77 aa13.84□□□□□ -0.19
MSH6-206ENST00000455383 MFSD4AQ8N468 514 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms