RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ADAD2Q8NCV1 583 aaKnown RBP11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 OR4X2Q8NGF9 303 aa11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMEM167AQ8TBQ9 72 aa11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 ARPC1AQ92747 370 aa11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 TP53RKQ96S44 253 aa11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 NAA60Q9H7X0 242 aa11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 BET1LQ9NYM9 111 aa11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 ZNF580Q9UK33 172 aa11.51□□□□□ -0.57
NCKIPSD-207ENST00000453349 JMJD1CQ15652 2540 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 MARCH11A6NNE9 402 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 FBXO24O75426 580 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 UPK1BO75841 260 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 SRSF4Q08170 494 aaKnown RBP11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 MZT2BQ6NZ67 158 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 TEX38Q6PEX7 206 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMED4Q7Z7H5 227 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 COMMD1Q8N668 190 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 SGMS2Q8NHU3 365 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 PHB2Q99623 299 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 CITED1Q99966 193 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 ZNF430Q9H8G1 570 aaPredicted RBP11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMEM140Q9NV12 185 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 WSB1Q9Y6I7 421 aa11.5□□□□□ -0.57
NCKIPSD-207ENST00000453349 UPK2O00526 184 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 ARPC1BO15143 372 aaKnown RBP11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 SNAPC5O75971 98 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 NDUFB6O95139 128 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 OR5AC1P0C628 307 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 EGR2P11161 476 aaPredicted RBP11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 ANXA3P12429 323 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 MRGPRG-AS1Q2M3A8 158 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 AKIRIN2Q53H80 203 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMEM128Q5BJH2 165 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 H2BFWTQ7Z2G1 175 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 CADM3Q8N126 398 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 CENPSQ8N2Z9 138 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 C11orf44Q8N8P7 122 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 GRPEL2Q8TAA5 225 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 WIPF2Q8TF74 440 aaPredicted RBP11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMEM68Q96MH6 324 aa11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 FAM103A1Q9BTL3 118 aaKnown RBP11.49□□□□□ -0.57
NCKIPSD-207ENST00000453349 MSGN1A6NI15 193 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 G3V318 75 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 IL6RP08887 468 aaPredicted RBP11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 CD28P10747 220 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 UCP1P25874 307 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 RPL8P62917 257 aaKnown RBP11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 ECSCRQ19T08 205 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 ZNF695Q8IW36 515 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 LFNGQ8NES3 379 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 GLYATL2Q8WU03 294 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMEM230Q96A57 120 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 SEC22AQ96IW7 307 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 TSC22D3Q99576 134 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMEM222Q9H0R3 208 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 FBXO7Q9Y3I1 522 aa11.48□□□□□ -0.57
NCKIPSD-207ENST00000453349 A0A1W2PN81 502 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 TCRBV4S1A1TA0A5B7 111 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 CDS2O95674 445 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 IGKV1-39P01597 117 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 OPN1MWP04001 364 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 IGKV1D-39P04432 117 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 FGF2P09038 288 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 OPN1MW2P0DN77 364 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 OPN1MW3P0DN78 364 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 HLA-GP17693 338 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 PPIFP30405 207 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 BTCP35070 178 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 CHRNA7P36544 502 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 RPL27AP46776 148 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 NDPQ00604 133 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 TMEM65Q6PI78 240 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 C10orf99Q6UWK7 81 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 RNASE11Q8TAA1 199 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 SRSF12Q8WXF0 261 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 RRNAD1Q96FB5 475 aaKnown RBP11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 GALNT14Q96FL9 552 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 SPIN2AQ99865 258 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 SPIN2BQ9BPZ2 258 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 COMMD5Q9GZQ3 224 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 FKBP11Q9NYL4 201 aa11.47□□□□□ -0.57
NCKIPSD-207ENST00000453349 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 PIGBOS1A0A0B4J2F0 54 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 IGHG4P01861 327 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 ELANEP08246 267 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 AKR1C2P52895 323 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 CD83Q01151 205 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 CFHR3Q02985 330 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 FOXE3Q13461 319 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 ASAH1Q13510 395 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 CXorf66Q5JRM2 361 aaPredicted RBP11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 SLC25A42Q86VD7 318 aa11.46□□□□□ -0.57
NCKIPSD-207ENST00000453349 MINDY2Q8NBR6 621 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms