RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 POU2AF1Q16633 256 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 PHLDA2Q53GA4 152 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 TMEM65Q6PI78 240 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 ZNF695Q8IW36 515 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 TMEM167AQ8TBQ9 72 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 MYOZ3Q8TDC0 251 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 ZNF486Q96H40 463 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-202ENST00000452372 TMEM68Q96MH6 324 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 THAP7Q9BT49 309 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-202ENST00000452372 KLK15Q9H2R5 256 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 PLEKHA2Q9HB19 425 aa15.56■□□□□ 0.08
COL9A3-202ENST00000452372 DISC1C4P0D8 188 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 KBTBD11O94819 623 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 ETV6P41212 452 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 RAB9AP51151 201 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 KIAA0141Q14154 515 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-202ENST00000452372 PYDC2Q56P42 97 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 C18orf65Q6ZTR6 163 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 OR4C16Q8NGL9 310 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 OR5M8Q8NGP6 311 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 OR6Q1Q8NGQ2 317 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 BET1LQ9NYM9 111 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 COMMD9Q9P000 198 aa15.55■□□□□ 0.08
COL9A3-202ENST00000452372 NUDT19A8MXV4 375 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 ACTL6BO94805 426 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 PGAM2P15259 253 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 ZNF79Q15937 498 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 SCGB2B2Q4G0G5 96 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 SPANXN2Q5MJ10 180 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 OR4A47Q6IF82 309 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 FAAP20Q6NZ36 180 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 SSX9Q7RTT3 188 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 TBC1D26Q86UD7 250 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 Q8N402 240 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 ZNF491Q8N8L2 437 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 KLHL30-AS1Q8NEE0 82 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 SRSF12Q8WXF0 261 aaKnown RBP15.54■□□□□ 0.08
COL9A3-202ENST00000452372 SLC2A9Q9NRM0 540 aa15.54■□□□□ 0.08
COL9A3-202ENST00000452372 FAM212BQ9NTI7 297 aaPredicted RBP15.54■□□□□ 0.08
COL9A3-202ENST00000452372 MSGN1A6NI15 193 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 S1PR2O95136 353 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 IL6RP08887 468 aaPredicted RBP15.53■□□□□ 0.08
COL9A3-202ENST00000452372 CD40LGP29965 261 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 MAS1LP35410 378 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 LPAR6P43657 344 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 RND3P61587 244 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 ZNF585BQ52M93 769 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 ASPHD1Q5U4P2 390 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 C8orf86Q6ZUL3 223 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 OR4A5Q8NH83 315 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 ZFAND1Q8TCF1 268 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 UBE2E2Q96LR5 201 aa15.53■□□□□ 0.08
COL9A3-202ENST00000452372 MPPED1O15442 326 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 PRB2P02812 416 aaPredicted RBP15.52■□□□□ 0.08
COL9A3-202ENST00000452372 ECI1P42126 302 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 PPP5CP53041 499 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 WFDC9Q8NEX5 89 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 OR5T1Q8NG75 326 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 TRIM63Q969Q1 353 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 MRGPRFQ96AM1 343 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 PRRT1Q99946 306 aa15.52■□□□□ 0.08
COL9A3-202ENST00000452372 PF4P02776 101 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 PI3P19957 117 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 PIGPP57054 158 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 RPL8P62917 257 aaKnown RBP15.51■□□□□ 0.07
COL9A3-202ENST00000452372 ETV3LQ6ZN32 361 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 CADM3Q8N126 398 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 DMBX1Q8NFW5 382 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 OR13C8Q8NGS7 320 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 MARCH1Q8TCQ1 289 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 CASTOR1Q8WTX7 329 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 PHB2Q99623 299 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 SPIN2AQ99865 258 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 SPIN2BQ9BPZ2 258 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 SLA2Q9H6Q3 261 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 HRASLSQ9HDD0 168 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 SLC2A8Q9NY64 477 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 VSIG4Q9Y279 399 aa15.51■□□□□ 0.07
COL9A3-202ENST00000452372 A6NHS1 94 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 MARCH11A6NNE9 402 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 H3BUA1 57 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 UPK2O00526 184 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 BRI3O95415 125 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 CTSDP07339 412 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-202ENST00000452372 MYCNOSP40205 109 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 KLF9Q13886 244 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-202ENST00000452372 SURF2Q15527 256 aaPredicted RBP15.5■□□□□ 0.07
COL9A3-202ENST00000452372 OXLD1Q5BKU9 147 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 OR51S1Q8NGJ8 323 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 C4orf3Q8WVX3 66 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 TMEM140Q9NV12 185 aa15.5■□□□□ 0.07
COL9A3-202ENST00000452372 TRAV3A0A0B4J244 114 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 KRASP01116 189 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 FGF2P09038 288 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 HLA-GP17693 338 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 RPL27AP46776 148 aaKnown RBP15.49■□□□□ 0.07
COL9A3-202ENST00000452372 AP3S2P59780 193 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 ERVK-16P61578 105 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 C10orf55Q5SWW7 151 aa15.49■□□□□ 0.07
COL9A3-202ENST00000452372 TOMM5Q8N4H5 51 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms