RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 RPEL1Q2QD12 228 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 VAX1Q5SQQ9 334 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 AADACL3Q5VUY0 350 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 ZNF66Q6ZN08 573 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 SNX29P2Q8IUI4 249 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 OR6Q1Q8NGQ2 317 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 OR5H2Q8NGV7 314 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 VSTM2AQ8TAG5 236 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 TMEM68Q96MH6 324 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 OR2A7Q96R45 310 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 ELOVL1Q9BW60 279 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 FXYD6Q9H0Q3 95 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 AKIP1Q9NQ31 210 aa7.43□□□□□ -1.22
USP54-207ENST00000451492 PEF1Q9UBV8 284 aaKnown RBP7.43□□□□□ -1.22
USP54-207ENST00000451492 LSM4Q9Y4Z0 139 aaKnown RBP7.43□□□□□ -1.22
USP54-207ENST00000451492 TRIM64CA6NLI5 447 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 TEX22C9J3V5 150 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 E7EUB6 86 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 HPGDSO60760 199 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 S1PR2O95136 353 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 HRASP01112 189 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 SMIM18P0DKX4 95 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 AREGP15514 252 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 ZP3P21754 424 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 PRSS3P35030 304 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 HRH1P35367 487 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 KIR2DS2P43631 304 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 OR4A47Q6IF82 309 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 ANKRD13BQ86YJ7 626 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 PUSL1Q8N0Z8 303 aaKnown RBP7.42□□□□□ -1.22
USP54-207ENST00000451492 DMBX1Q8NFW5 382 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 TMEM167AQ8TBQ9 72 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 SPIN2AQ99865 258 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 SPIN2BQ9BPZ2 258 aa7.42□□□□□ -1.22
USP54-207ENST00000451492 TRAV3A0A0B4J244 114 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 SMIM31A0A1B0GVY4 71 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 A0A1B0GW64 132 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 PPP5D1E7EU14 171 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 TMEM127O75204 238 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 IL6RP08887 468 aaPredicted RBP7.41□□□□□ -1.22
USP54-207ENST00000451492 ELK1P19419 428 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 RPL8P62917 257 aaKnown RBP7.41□□□□□ -1.22
USP54-207ENST00000451492 ATP5G2Q06055 141 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 GPR107Q5VW38 600 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 ZNF343Q6P1L6 599 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 GIMAP1Q8WWP7 306 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 KCTD12Q96CX2 325 aaKnown RBP7.41□□□□□ -1.22
USP54-207ENST00000451492 USMG5Q96IX5 58 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 SELENOKQ9Y6D0 94 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 SMAD5-AS1Q9Y6J3 95 aa7.41□□□□□ -1.22
USP54-207ENST00000451492 FAM223BA6NKX1 122 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 BMPR1BO00238 502 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 HPRT1P00492 218 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 HLA-AP01891 365 aaKnown RBP7.4□□□□□ -1.22
USP54-207ENST00000451492 DEFA4P12838 97 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 HLA-GP17693 338 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 EDN2P20800 178 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 GNRHRP30968 328 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 RORCP51449 518 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 TAS2R46P59540 309 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 TSPAN5P62079 268 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 C15orf32Q32M92 178 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 PHLDA2Q53GA4 152 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 SLC25A42Q86VD7 318 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 FAM223AQ8IWN6 122 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 TTC9CQ8N5M4 171 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 ZBTB34Q8NCN2 500 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 OR9G4Q8NGQ1 327 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 MOB3AQ96BX8 217 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 ZC4H2Q9NQZ6 224 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 TMEM140Q9NV12 185 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 FBXL7Q9UJT9 491 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 ANAPC10Q9UM13 185 aa7.4□□□□□ -1.22
USP54-207ENST00000451492 SORL1Q92673 2214 aa7.4□□□□□ -1.23
USP54-207ENST00000451492 M0QYG6 137 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 NDUFB8O95169 186 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 IGLV1-51P01701 117 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 APOA1P02647 267 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 FRMD6-AS1P0C7T7 363 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 ZNF735P0CB33 412 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 NQO2P16083 231 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 PSMB6P28072 239 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 MAS1LP35410 378 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 TAS2R31P59538 309 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 ERVK-16P61578 105 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 KLF5Q13887 457 aaPredicted RBP7.39□□□□□ -1.23
USP54-207ENST00000451492 MSMO1Q15800 293 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 HINT2Q9BX68 163 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 MRPS26Q9BYN8 205 aaKnown RBP7.39□□□□□ -1.23
USP54-207ENST00000451492 BET1LQ9NYM9 111 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 ZNF257Q9Y2Q1 563 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 NSG2Q9Y328 171 aa7.39□□□□□ -1.23
USP54-207ENST00000451492 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.38□□□□□ -1.23
USP54-207ENST00000451492 TRBV9A0A0B4J1U6 114 aa7.38□□□□□ -1.23
USP54-207ENST00000451492 MFSD2BA6NFX1 497 aa7.38□□□□□ -1.23
USP54-207ENST00000451492 CGB1A6NKQ9 187 aa7.38□□□□□ -1.23
USP54-207ENST00000451492 MARCH11A6NNE9 402 aa7.38□□□□□ -1.23
USP54-207ENST00000451492 NPIPB5A8MRT5 1133 aa7.38□□□□□ -1.23
USP54-207ENST00000451492 GPR31O00270 319 aa7.38□□□□□ -1.23
USP54-207ENST00000451492 UPK2O00526 184 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms