RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ADAM30Q9UKF2 790 aa12.29□□□□□ -0.44
SGCE-208ENST00000450385 ANAPC10Q9UM13 185 aa12.29□□□□□ -0.44
SGCE-208ENST00000450385 U3KQK5 164 aa12.29□□□□□ -0.44
SGCE-208ENST00000450385 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 A8MZ25 164 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 HPRT1P00492 218 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 CRYGCP07315 174 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 ZNF735P0CB33 412 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 SPNP16150 400 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 HIST1H1BP16401 226 aaKnown RBP12.28□□□□□ -0.44
SGCE-208ENST00000450385 BRWD1-AS2P59051 145 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 RPEL1Q2QD12 228 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 TMEM69Q5SWH9 247 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 OR2K2Q8NGT1 345 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 SLC5A7Q9GZV3 580 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 TAS2R8Q9NYW2 309 aa12.28□□□□□ -0.44
SGCE-208ENST00000450385 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.27□□□□□ -0.45
SGCE-208ENST00000450385 ANKRD34BA5PLL1 514 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 DPPA5A6NC42 116 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 NQO2P16083 231 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 PRSS3P35030 304 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
SGCE-208ENST00000450385 HERV-K104P61576 105 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 RPL8P62917 257 aaKnown RBP12.27□□□□□ -0.45
SGCE-208ENST00000450385 RHOGP84095 191 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 THOC7Q6I9Y2 204 aaKnown RBP12.27□□□□□ -0.45
SGCE-208ENST00000450385 SPAG16Q8N0X2 631 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 SAMD12Q8N8I0 201 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 PLEKHA2Q9HB19 425 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 AKIP1Q9NQ31 210 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 CCL28Q9NRJ3 127 aa12.27□□□□□ -0.45
SGCE-208ENST00000450385 CYB5BO43169 146 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 TPPPO94811 219 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 APOA1P02647 267 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 C11orf87Q6NUJ2 197 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 LPCAT3Q6P1A2 487 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 HSD17B13Q7Z5P4 300 aaPredicted RBP12.26□□□□□ -0.45
SGCE-208ENST00000450385 CMTM1Q8IZ96 169 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 SCPEP1Q9HB40 452 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 FAM212BQ9NTI7 297 aaPredicted RBP12.26□□□□□ -0.45
SGCE-208ENST00000450385 COMMD9Q9P000 198 aa12.26□□□□□ -0.45
SGCE-208ENST00000450385 TEX22C9J3V5 150 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 SULT1C2O00338 296 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 IL6RP08887 468 aaPredicted RBP12.25□□□□□ -0.45
SGCE-208ENST00000450385 HLA-GP17693 338 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 GNRHRP30968 328 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 SYNJ2BPP57105 145 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 TAS2R20P59543 309 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 OR2B11Q5JQS5 317 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 Q8N402 240 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 OR6F1Q8NGZ6 308 aa12.25□□□□□ -0.45
SGCE-208ENST00000450385 FYTTD1Q96QD9 318 aaKnown RBP12.25□□□□□ -0.45
SGCE-208ENST00000450385 PSMB6P28072 239 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 S100GP29377 79 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
SGCE-208ENST00000450385 C15orf32Q32M92 178 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 LCN12Q6JVE5 192 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 IL34Q6ZMJ4 242 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 LAX1Q8IWV1 398 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 VKORC1L1Q8N0U8 176 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 OR5H2Q8NGV7 314 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 MOB3AQ96BX8 217 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 EHFQ9NZC4 300 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 THYN1Q9P016 225 aa12.24□□□□□ -0.45
SGCE-208ENST00000450385 TRBV7-1A0A0A6YYK4 115 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 LGALS9O00182 355 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 GGCTO75223 188 aaKnown RBP12.23□□□□□ -0.45
SGCE-208ENST00000450385 APELAP0DMC3 54 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 CTRB1P17538 263 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 F2RP25116 425 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 RORCP51449 518 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 MECP2P51608 486 aaKnown RBP12.23□□□□□ -0.45
SGCE-208ENST00000450385 FXYD4P59646 89 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 ZNF45Q02386 682 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 CTRB2Q6GPI1 263 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 OR4A47Q6IF82 309 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 MZT2AQ6P582 158 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 ZNF818PQ6ZRF7 136 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 GPHB5Q86YW7 130 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 SGPP2Q8IWX5 399 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 C15orf40Q8WUR7 153 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 AP3S1Q92572 193 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 CXorf58Q96LI9 332 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 RSRP1Q9BUV0 290 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 COMMD5Q9GZQ3 224 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 ZMAT4Q9H898 229 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 HRASLSQ9HDD0 168 aa12.23□□□□□ -0.45
SGCE-208ENST00000450385 UPK2O00526 184 aa12.22□□□□□ -0.45
SGCE-208ENST00000450385 CSN3P07498 182 aa12.22□□□□□ -0.45
SGCE-208ENST00000450385 RFX2P48378 723 aa12.22□□□□□ -0.45
SGCE-208ENST00000450385 LSM3P62310 102 aaKnown RBP12.22□□□□□ -0.45
SGCE-208ENST00000450385 GPX8Q8TED1 209 aa12.22□□□□□ -0.45
SGCE-208ENST00000450385 ATP6V0BQ99437 205 aa12.22□□□□□ -0.45
SGCE-208ENST00000450385 ZNF2Q9BSG1 426 aaPredicted RBP12.22□□□□□ -0.45
SGCE-208ENST00000450385 FKBP11Q9NYL4 201 aa12.22□□□□□ -0.45
SGCE-208ENST00000450385 FBXL7Q9UJT9 491 aa12.22□□□□□ -0.45
SGCE-208ENST00000450385 HMX3A6NHT5 357 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 BMPR1BO00238 502 aa12.21□□□□□ -0.45
SGCE-208ENST00000450385 GPR31O00270 319 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms