RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DNAH9Q9NYC9 4486 aa11.7□□□□□ -0.54
CHD3-205ENST00000449744 HMX3A6NHT5 357 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 IGLV1-51P01701 117 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 TRBV12-3P01733 135 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 HERV-K104P61576 105 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 EXOSC2Q13868 293 aaKnown RBP11.69□□□□□ -0.54
CHD3-205ENST00000449744 TMEM17Q86X19 198 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 PUSL1Q8N0Z8 303 aaKnown RBP11.69□□□□□ -0.54
CHD3-205ENST00000449744 BORCS5Q969J3 196 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 EHFQ9NZC4 300 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 ZNF257Q9Y2Q1 563 aa11.69□□□□□ -0.54
CHD3-205ENST00000449744 TRBV9A0A0B4J1U6 114 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 RBMXL2O75526 392 aaKnown RBP11.68□□□□□ -0.54
CHD3-205ENST00000449744 OR2J3O76001 311 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 BRWD1-AS2P59051 145 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 TAS2R20P59543 309 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 RPL8P62917 257 aaKnown RBP11.68□□□□□ -0.54
CHD3-205ENST00000449744 ZNF45Q02386 682 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 NECAP1Q8NC96 275 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 OR4A5Q8NH83 315 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
CHD3-205ENST00000449744 HRASLSQ9HDD0 168 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 TNCP24821 2201 aa11.68□□□□□ -0.54
CHD3-205ENST00000449744 TRIM64CA6NLI5 447 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 TEX22C9J3V5 150 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 H0Y980 276 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 SULT1C2O00338 296 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.549e-6■■□□□ 11.7
CHD3-205ENST00000449744 DHFRP00374 187 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 HPRT1P00492 218 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 PRSS3P35030 304 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 FAM209BQ5JX69 171 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 AADACL3Q5VUY0 350 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 ZNF818PQ6ZRF7 136 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 OR51H1Q8NH63 302 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 SLC25A46Q96AG3 418 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 SLC2A9Q9NRM0 540 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 BET1LQ9NYM9 111 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 ADAM30Q9UKF2 790 aa11.67□□□□□ -0.54
CHD3-205ENST00000449744 SMIM31A0A1B0GVY4 71 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 NPIPB5A8MRT5 1133 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 IL6RP08887 468 aaPredicted RBP11.66□□□□□ -0.54
CHD3-205ENST00000449744 FRMD6-AS1P0C7T7 363 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 ZNF735P0CB33 412 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 NQO2P16083 231 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 HLA-GP17693 338 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 TAS2R31P59538 309 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 TAS2R46P59540 309 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 C15orf32Q32M92 178 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 SBSPONQ8IVN8 264 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 SGPP2Q8IWX5 399 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 OR5H2Q8NGV7 314 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 CD300LFQ8TDQ1 290 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 ZNF2Q9BSG1 426 aaPredicted RBP11.66□□□□□ -0.54
CHD3-205ENST00000449744 FUNDC2Q9BWH2 189 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 COMMD3Q9UBI1 195 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 FBXL7Q9UJT9 491 aa11.66□□□□□ -0.54
CHD3-205ENST00000449744 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.54
CHD3-205ENST00000449744 E7EUB6 86 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 BMPR1BO00238 502 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 PMP2P02689 132 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 CSN3P07498 182 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 DEFA4P12838 97 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 PSMB6P28072 239 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 RFX2P48378 723 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 NCS1P62166 190 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 IL34Q6ZMJ4 242 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 DMBX1Q8NFW5 382 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 SIGLEC8Q9NYZ4 499 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 ANAPC10Q9UM13 185 aa11.65□□□□□ -0.54
CHD3-205ENST00000449744 CRYGCP07315 174 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 AREGP15514 252 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
CHD3-205ENST00000449744 GNRHRP30968 328 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 VBP1P61758 197 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 Q8N402 240 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 OR6F1Q8NGZ6 308 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 MOB3AQ96BX8 217 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 CMTM3Q96MX0 182 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 COMMD5Q9GZQ3 224 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 ZMAT4Q9H898 229 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 PLEKHA2Q9HB19 425 aa11.64□□□□□ -0.55
CHD3-205ENST00000449744 UPK2O00526 184 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 GGCTO75223 188 aaKnown RBP11.63□□□□□ -0.55
CHD3-205ENST00000449744 S1PR2O95136 353 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 NDUFB8O95169 186 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 APOA1P02647 267 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 RLN1P04808 185 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 EIF4EP06730 217 aaKnown RBP11.63□□□□□ -0.55
CHD3-205ENST00000449744 IGHV4-30-4P0DP06 118 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 MYOD1P15172 320 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 CTRB1P17538 263 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 NAT1P18440 290 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 HLA-DMAP28067 261 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 ERVK-16P61578 105 aa11.63□□□□□ -0.55
CHD3-205ENST00000449744 POU2AF1Q16633 256 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms